Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A1P43005 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A1P43005 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLC1A1P43005 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLC1A1P43005 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A1P43005 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC1A1P43005 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC1A1P43005 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC1A1P43005 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A1P43005 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A1P43005 AC145285.3-201ENST00000564603 959 ntBASIC17.09■□□□□ 0.33
SLC1A1P43005 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC1A1P43005 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A1P43005 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SLC1A1P43005 HLA-A-201ENST00000376802 1334 ntBASIC17.09■□□□□ 0.33
SLC1A1P43005 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SLC1A1P43005 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A1P43005 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC1A1P43005 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A1P43005 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A1P43005 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A1P43005 AC016027.1-202ENST00000607927 1699 ntBASIC17.09■□□□□ 0.33
SLC1A1P43005 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
SLC1A1P43005 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC1A1P43005 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC1A1P43005 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC1A1P43005 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLC1A1P43005 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A1P43005 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC1A1P43005 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A1P43005 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A1P43005 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A1P43005 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SLC1A1P43005 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC1A1P43005 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.08■□□□□ 0.33
SLC1A1P43005 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SLC1A1P43005 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC1A1P43005 AC073439.1-201ENST00000624121 1774 ntBASIC17.08■□□□□ 0.33
SLC1A1P43005 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC1A1P43005 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SLC1A1P43005 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SLC1A1P43005 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 AC025580.3-201ENST00000617932 1424 ntBASIC17.08■□□□□ 0.32
SLC1A1P43005 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
SLC1A1P43005 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC1A1P43005 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SLC1A1P43005 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC1A1P43005 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC1A1P43005 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC1A1P43005 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.08■□□□□ 0.32
SLC1A1P43005 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
SLC1A1P43005 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.08■□□□□ 0.32
SLC1A1P43005 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC1A1P43005 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC1A1P43005 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.08■□□□□ 0.32
SLC1A1P43005 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC1A1P43005 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.08■□□□□ 0.32
SLC1A1P43005 AC004877.2-201ENST00000623941 599 ntBASIC17.08■□□□□ 0.32
SLC1A1P43005 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A1P43005 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC1A1P43005 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC1A1P43005 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SLC1A1P43005 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC1A1P43005 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 AL589702.1-201ENST00000641229 1509 ntBASIC17.07■□□□□ 0.32
SLC1A1P43005 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 BCAR1-209ENST00000546196 1340 ntBASIC17.07■□□□□ 0.32
SLC1A1P43005 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC1A1P43005 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.07■□□□□ 0.32
SLC1A1P43005 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms