Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.91■□□□□ 0.78
PDE6BP35913 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.91■□□□□ 0.78
PDE6BP35913 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PDE6BP35913 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.91■□□□□ 0.78
PDE6BP35913 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.9■□□□□ 0.78
PDE6BP35913 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6BP35913 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6BP35913 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6BP35913 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6BP35913 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
PDE6BP35913 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6BP35913 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6BP35913 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6BP35913 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6BP35913 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6BP35913 SOCS2P1-201ENST00000417727 557 ntBASIC19.9■□□□□ 0.78
PDE6BP35913 AC134915.1-201ENST00000426461 574 ntBASIC19.9■□□□□ 0.78
PDE6BP35913 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.9■□□□□ 0.78
PDE6BP35913 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.9■□□□□ 0.78
PDE6BP35913 AL355864.2-201ENST00000447420 863 ntBASIC19.9■□□□□ 0.78
PDE6BP35913 AC007551.1-201ENST00000457394 519 ntBASIC19.9■□□□□ 0.78
PDE6BP35913 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6BP35913 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PDE6BP35913 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.9■□□□□ 0.78
PDE6BP35913 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.9■□□□□ 0.78
PDE6BP35913 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.9■□□□□ 0.78
PDE6BP35913 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6BP35913 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.9■□□□□ 0.78
PDE6BP35913 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.9■□□□□ 0.78
PDE6BP35913 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
PDE6BP35913 AL691432.1-201ENST00000596308 1422 ntBASIC19.9■□□□□ 0.78
PDE6BP35913 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.9■□□□□ 0.78
PDE6BP35913 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.9■□□□□ 0.78
PDE6BP35913 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PDE6BP35913 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PDE6BP35913 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.9■□□□□ 0.78
PDE6BP35913 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PDE6BP35913 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.89■□□□□ 0.78
PDE6BP35913 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDE6BP35913 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDE6BP35913 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PDE6BP35913 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDE6BP35913 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.89■□□□□ 0.77
PDE6BP35913 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDE6BP35913 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDE6BP35913 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.89■□□□□ 0.77
PDE6BP35913 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDE6BP35913 AZGP1P1-201ENST00000411909 902 ntBASIC19.89■□□□□ 0.77
PDE6BP35913 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.89■□□□□ 0.77
PDE6BP35913 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDE6BP35913 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.89■□□□□ 0.77
PDE6BP35913 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.89■□□□□ 0.77
PDE6BP35913 RPL13AP25-201ENST00000484130 612 ntBASIC19.89■□□□□ 0.77
PDE6BP35913 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.89■□□□□ 0.77
PDE6BP35913 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDE6BP35913 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.89■□□□□ 0.77
PDE6BP35913 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.89■□□□□ 0.77
PDE6BP35913 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDE6BP35913 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.89■□□□□ 0.77
PDE6BP35913 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDE6BP35913 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDE6BP35913 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDE6BP35913 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6BP35913 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6BP35913 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6BP35913 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6BP35913 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE6BP35913 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6BP35913 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6BP35913 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6BP35913 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE6BP35913 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6BP35913 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE6BP35913 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE6BP35913 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.88■□□□□ 0.77
PDE6BP35913 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6BP35913 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.88■□□□□ 0.77
PDE6BP35913 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE6BP35913 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.88■□□□□ 0.77
PDE6BP35913 AC099548.2-209ENST00000480264 625 ntBASIC19.88■□□□□ 0.77
PDE6BP35913 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.88■□□□□ 0.77
PDE6BP35913 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.88■□□□□ 0.77
PDE6BP35913 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE6BP35913 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.88■□□□□ 0.77
PDE6BP35913 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.88■□□□□ 0.77
PDE6BP35913 IGHV3OR16-16-201ENST00000563644 343 ntBASIC19.88■□□□□ 0.77
PDE6BP35913 AC124283.3-201ENST00000570869 594 ntBASIC19.88■□□□□ 0.77
PDE6BP35913 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.88■□□□□ 0.77
PDE6BP35913 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PDE6BP35913 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.88■□□□□ 0.77
PDE6BP35913 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.88■□□□□ 0.77
PDE6BP35913 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms