Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.048e-6■□□□□ 10.8
XRN2Q9H0D6 PCNP-206ENST00000486406 742 ntTSL 28.54□□□□□ -1.041e-12■□□□□ 10.8
XRN2Q9H0D6 PHF12-209ENST00000582436 5697 ntTSL 58.09□□□□□ -1.118e-6■□□□□ 10.8
XRN2Q9H0D6 CTTN-214ENST00000532334 481 ntTSL 27.98□□□□□ -1.136e-7■□□□□ 10.8
XRN2Q9H0D6 FTX-204ENST00000430772 708 ntTSL 57.87□□□□□ -1.156e-7■□□□□ 10.8
XRN2Q9H0D6 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.232e-14■□□□□ 10.8
XRN2Q9H0D6 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.18□□□□□ -1.268e-6■□□□□ 10.8
XRN2Q9H0D6 FN1-213ENST00000456923 3720 ntTSL 27.1□□□□□ -1.278e-6■□□□□ 10.8
XRN2Q9H0D6 C16orf70-204ENST00000565900 655 ntTSL 37.08□□□□□ -1.286e-7■□□□□ 10.8
XRN2Q9H0D6 SETD5-226ENST00000490791 667 ntTSL 36.96□□□□□ -1.31e-7■□□□□ 10.8
XRN2Q9H0D6 C1RL-202ENST00000504702 504 ntTSL 26.81□□□□□ -1.326e-7■□□□□ 10.8
XRN2Q9H0D6 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.398e-6■□□□□ 10.8
XRN2Q9H0D6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.472e-14■□□□□ 10.8
XRN2Q9H0D6 ATP11C-209ENST00000485626 643 ntTSL 55.73□□□□□ -1.496e-7■□□□□ 10.8
XRN2Q9H0D6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.522e-14■□□□□ 10.8
XRN2Q9H0D6 FN1-224ENST00000492816 9171 ntTSL 55.58□□□□□ -1.528e-6■□□□□ 10.8
XRN2Q9H0D6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.538e-6■□□□□ 10.8
XRN2Q9H0D6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.51□□□□□ -1.691e-12■□□□□ 10.8
XRN2Q9H0D6 LINC-PINT-206ENST00000435523 553 ntTSL 33.73□□□□□ -1.818e-6■□□□□ 10.8
XRN2Q9H0D6 FN1-221ENST00000480737 384 ntTSL 23.19□□□□□ -1.98e-6■□□□□ 10.8
XRN2Q9H0D6 XIAP-204ENST00000430625 528 ntTSL 32.39□□□□□ -2.038e-6■□□□□ 10.8
XRN2Q9H0D6 RNU6-13P-201ENST00000384248 107 ntBASIC0.2□□□□□ -2.388e-6■□□□□ 10.8
XRN2Q9H0D6 DCXR-205ENST00000577996 98 ntTSL 3-0.64□□□□□ -2.518e-6■□□□□ 10.8
XRN2Q9H0D6 WDR27-202ENST00000441385 683 ntTSL 315.53■□□□□ 0.084e-6■□□□□ 10.8
XRN2Q9H0D6 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.154e-6■□□□□ 10.8
XRN2Q9H0D6 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.364e-6■□□□□ 10.8
XRN2Q9H0D6 WDR27-211ENST00000546525 3511 ntTSL 1 (best)12□□□□□ -0.494e-6■□□□□ 10.8
XRN2Q9H0D6 WDR27-205ENST00000467418 947 ntTSL 511.66□□□□□ -0.544e-6■□□□□ 10.8
XRN2Q9H0D6 MLXIPL-208ENST00000456640 706 ntTSL 520.01■□□□□ 0.791e-6■□□□□ 10.8
XRN2Q9H0D6 SEPT9-218ENST00000587514 540 ntTSL 525.98■■□□□ 1.753e-6■□□□□ 10.8
XRN2Q9H0D6 SEPT9-230ENST00000590586 572 ntTSL 424.18■■□□□ 1.463e-6■□□□□ 10.8
XRN2Q9H0D6 MICALL2-205ENST00000467783 639 ntTSL 320.68■□□□□ 0.94e-7■□□□□ 10.8
XRN2Q9H0D6 MICALL2-209ENST00000479007 1855 ntTSL 220.43■□□□□ 0.864e-7■□□□□ 10.8
XRN2Q9H0D6 MICALL2-207ENST00000471899 899 ntTSL 218.72■□□□□ 0.594e-7■□□□□ 10.8
XRN2Q9H0D6 MICALL2-215ENST00000496184 2722 ntTSL 217.22■□□□□ 0.354e-7■□□□□ 10.8
XRN2Q9H0D6 CUL4A-211ENST00000498562 790 ntTSL 331.45■■■□□ 2.635e-7■□□□□ 10.8
XRN2Q9H0D6 CUL4A-205ENST00000463426 893 ntTSL 329.79■■■□□ 2.365e-7■□□□□ 10.8
XRN2Q9H0D6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.32■□□□□ 0.847e-8■□□□□ 10.8
XRN2Q9H0D6 SREBF2-207ENST00000490262 450 ntTSL 214.31□□□□□ -0.121e-9■□□□□ 10.8
XRN2Q9H0D6 PTOV1-213ENST00000600105 635 ntTSL 323.49■■□□□ 1.353e-6■□□□□ 10.8
XRN2Q9H0D6 PPP1R12C-205ENST00000588277 419 ntTSL 322.93■■□□□ 1.261e-6■□□□□ 10.8
XRN2Q9H0D6 PPP1R12C-208ENST00000592754 827 ntTSL 218.8■□□□□ 0.61e-6■□□□□ 10.8
XRN2Q9H0D6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.956e-7■□□□□ 10.7
XRN2Q9H0D6 PRSS21-208ENST00000575199 679 ntTSL 225.14■■□□□ 1.626e-7■□□□□ 10.7
XRN2Q9H0D6 PRSS21-203ENST00000570594 809 ntTSL 322.75■■□□□ 1.236e-7■□□□□ 10.7
XRN2Q9H0D6 PRSS21-207ENST00000574813 873 ntTSL 321.98■■□□□ 1.116e-7■□□□□ 10.7
XRN2Q9H0D6 PRSS21-210ENST00000577043 814 ntTSL 521.75■■□□□ 1.076e-7■□□□□ 10.7
XRN2Q9H0D6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.15■□□□□ 0.986e-7■□□□□ 10.7
XRN2Q9H0D6 PRSS21-206ENST00000574265 860 ntTSL 315.14■□□□□ 0.016e-7■□□□□ 10.7
XRN2Q9H0D6 PRSS21-204ENST00000570629 626 ntTSL 214.59□□□□□ -0.076e-7■□□□□ 10.7
XRN2Q9H0D6 PRSS21-209ENST00000575739 378 ntTSL 311.12□□□□□ -0.636e-7■□□□□ 10.7
XRN2Q9H0D6 SH3D19-212ENST00000604440 555 ntTSL 410.39□□□□□ -0.755e-6■□□□□ 10.7
XRN2Q9H0D6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.81■■□□□ 1.249e-8■□□□□ 10.7
XRN2Q9H0D6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.75■□□□□ 0.439e-8■□□□□ 10.7
XRN2Q9H0D6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.39e-8■□□□□ 10.7
XRN2Q9H0D6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.26e-7■□□□□ 10.7
XRN2Q9H0D6 CDC14B-209ENST00000474602 4960 ntTSL 1 (best)22.41■■□□□ 1.186e-7■□□□□ 10.7
XRN2Q9H0D6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.362e-7■□□□□ 10.7
XRN2Q9H0D6 RCC1-205ENST00000411533 1169 ntTSL 516.42■□□□□ 0.222e-7■□□□□ 10.7
XRN2Q9H0D6 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.02■□□□□ 0.162e-7■□□□□ 10.7
XRN2Q9H0D6 RCC1-207ENST00000427469 903 ntTSL 515.67■□□□□ 0.12e-7■□□□□ 10.7
XRN2Q9H0D6 RCC1-210ENST00000434290 1070 ntTSL 515.42■□□□□ 0.062e-7■□□□□ 10.7
XRN2Q9H0D6 RCC1-206ENST00000419074 997 ntTSL 514.88□□□□□ -0.032e-7■□□□□ 10.7
XRN2Q9H0D6 RCC1-204ENST00000398958 2715 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.582e-7■□□□□ 10.7
XRN2Q9H0D6 RCC1-203ENST00000373833 2844 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.62e-7■□□□□ 10.7
XRN2Q9H0D6 NSMF-210ENST00000484316 933 ntTSL 319.81■□□□□ 0.762e-6■□□□□ 10.7
XRN2Q9H0D6 NSMF-202ENST00000371468 672 ntTSL 218.49■□□□□ 0.552e-6■□□□□ 10.7
XRN2Q9H0D6 NSMF-207ENST00000371482 2888 ntTSL 1 (best)15.83■□□□□ 0.132e-6■□□□□ 10.7
XRN2Q9H0D6 ASGR1-206ENST00000573596 2083 ntTSL 519.51■□□□□ 0.711e-8■□□□□ 10.7
XRN2Q9H0D6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.03■□□□□ 0.641e-8■□□□□ 10.7
XRN2Q9H0D6 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.261e-8■□□□□ 10.7
XRN2Q9H0D6 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.02■□□□□ 0.161e-8■□□□□ 10.7
XRN2Q9H0D6 ASGR1-205ENST00000573083 855 ntTSL 311.71□□□□□ -0.531e-8■□□□□ 10.7
XRN2Q9H0D6 KMT2E-214ENST00000495267 1133 ntTSL 1 (best)23.74■■□□□ 1.391e-6■□□□□ 10.7
XRN2Q9H0D6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.23■□□□□ 0.511e-6■□□□□ 10.7
XRN2Q9H0D6 KMT2E-209ENST00000478990 1500 ntTSL 517.83■□□□□ 0.451e-6■□□□□ 10.7
XRN2Q9H0D6 KMT2E-203ENST00000334884 6840 ntTSL 515.29■□□□□ 0.041e-6■□□□□ 10.7
XRN2Q9H0D6 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.021e-6■□□□□ 10.7
XRN2Q9H0D6 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.091e-6■□□□□ 10.7
XRN2Q9H0D6 KMT2E-212ENST00000482560 1759 ntTSL 56.64□□□□□ -1.351e-6■□□□□ 10.7
XRN2Q9H0D6 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.85□□□□□ -1.631e-6■□□□□ 10.7
XRN2Q9H0D6 FAM171A1-202ENST00000455654 605 ntTSL 320.08■□□□□ 0.812e-6■□□□□ 10.7
XRN2Q9H0D6 FAM171A1-201ENST00000378116 3952 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.912e-6■□□□□ 10.7
XRN2Q9H0D6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.094e-7■□□□□ 10.7
XRN2Q9H0D6 E2F4-208ENST00000567007 2615 ntTSL 220.76■□□□□ 0.914e-7■□□□□ 10.7
XRN2Q9H0D6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.322e-6■□□□□ 10.7
XRN2Q9H0D6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.692e-6■□□□□ 10.7
XRN2Q9H0D6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.632e-6■□□□□ 10.7
XRN2Q9H0D6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.353e-7■□□□□ 10.7
XRN2Q9H0D6 ETFB-203ENST00000593992 603 ntTSL 218.43■□□□□ 0.543e-7■□□□□ 10.7
XRN2Q9H0D6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.493e-7■□□□□ 10.7
XRN2Q9H0D6 ETFB-205ENST00000596253 575 ntTSL 317.68■□□□□ 0.423e-7■□□□□ 10.7
XRN2Q9H0D6 ETFB-202ENST00000354232 3551 ntTSL 1 (best) BASIC10.41□□□□□ -0.743e-7■□□□□ 10.7
XRN2Q9H0D6 SLC9A3R1-203ENST00000578958 714 ntTSL 221.1■□□□□ 0.972e-6■□□□□ 10.7
XRN2Q9H0D6 SLC9A3R1-204ENST00000581356 519 ntTSL 315.04■□□□□ -02e-6■□□□□ 10.7
XRN2Q9H0D6 NECAB3-208ENST00000480994 732 ntTSL 520.01■□□□□ 0.796e-8■□□□□ 10.7
XRN2Q9H0D6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.52■□□□□ 0.083e-6■□□□□ 10.6
XRN2Q9H0D6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.26■□□□□ 0.033e-6■□□□□ 10.6
XRN2Q9H0D6 LDLR-201ENST00000252444 5337 ntAPPRIS ALT2 TSL 1 (best)14.41□□□□□ -0.13e-6■□□□□ 10.6
XRN2Q9H0D6 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC13.15□□□□□ -0.313e-6■□□□□ 10.6
Retrieved 100 of 21,068 protein–RNA pairs in 115.7 ms