RNA–Protein interactions for RNA: ENST00000486406.5

PCNP-206, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 2

Gene PCNP, Length 742 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-206ENST00000486406 CHIC1Q5VXU3 224 aa28.03■■■□□ 2.08
PCNP-206ENST00000486406 AEBP2Q6ZN18 517 aaPredicted RBP27.97■■■□□ 2.07
PCNP-206ENST00000486406 PHF23Q9BUL5 403 aaPredicted RBP24.7■■□□□ 1.54
PCNP-206ENST00000486406 SENP3Q9H4L4 574 aaPredicted RBP23.7■■□□□ 1.38
PCNP-206ENST00000486406 PLPPR3Q6T4P5 718 aa23.1■■□□□ 1.29
PCNP-206ENST00000486406 FOXD1Q16676 465 aa21.87■■□□□ 1.09
PCNP-206ENST00000486406 ADRA2BP18089 450 aa21.62■■□□□ 1.05
PCNP-206ENST00000486406 PPP6R1Q9UPN7 881 aa21.56■■□□□ 1.04
PCNP-206ENST00000486406 PIAS4Q8N2W9 510 aaPredicted RBP20.84■□□□□ 0.93
PCNP-206ENST00000486406 KCNA4P22459 653 aa20.72■□□□□ 0.91
PCNP-206ENST00000486406 PPP4R3CPQ6ZMV5 832 aa20.43■□□□□ 0.86
PCNP-206ENST00000486406 NCBP3Q53F19 620 aaKnown RBP20.14■□□□□ 0.81
PCNP-206ENST00000486406 EHMT2Q96KQ7 1210 aa20.12■□□□□ 0.81
PCNP-206ENST00000486406 MSH5O43196 834 aa19.94■□□□□ 0.78
PCNP-206ENST00000486406 SLC4A1APQ9BWU0 796 aaKnown RBP19.9■□□□□ 0.78
PCNP-206ENST00000486406 SCAF1Q9H7N4 1312 aaKnown RBP19.83■□□□□ 0.77
PCNP-206ENST00000486406 NPM3O75607 178 aaKnown RBP19.79■□□□□ 0.76
PCNP-206ENST00000486406 CNKSR2Q8WXI2 1034 aa19.72■□□□□ 0.75
PCNP-206ENST00000486406 CSRNP3Q8WYN3 585 aa19.52■□□□□ 0.72
PCNP-206ENST00000486406 MAPK8IP2Q13387 824 aaPredicted RBP19.39■□□□□ 0.69
PCNP-206ENST00000486406 RNF216Q9NWF9 866 aaPredicted RBP19.15■□□□□ 0.66
PCNP-206ENST00000486406 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
PCNP-206ENST00000486406 ZBTB22O15209 634 aa19.05■□□□□ 0.64
PCNP-206ENST00000486406 DMRT2Q9Y5R5 561 aa19.01■□□□□ 0.63
PCNP-206ENST00000486406 FOXD4L1Q9NU39 408 aa18.9■□□□□ 0.62
PCNP-206ENST00000486406 HOXD11P31277 338 aaPredicted RBP18.87■□□□□ 0.61
PCNP-206ENST00000486406 SLC4A2P04920 1241 aa18.5■□□□□ 0.55
PCNP-206ENST00000486406 MYCNP04198 464 aaPredicted RBP18.3■□□□□ 0.52
PCNP-206ENST00000486406 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
PCNP-206ENST00000486406 ATXN8OSP0DMR3 200 aa18.19■□□□□ 0.5
PCNP-206ENST00000486406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.04■□□□□ 0.483e-8■■■■□ 19.7
PCNP-206ENST00000486406 POTEDQ86YR6 584 aa17.86■□□□□ 0.45
PCNP-206ENST00000486406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.85■□□□□ 0.45
PCNP-206ENST00000486406 HNRNPUL2Q1KMD3 747 aaKnown RBP17.85■□□□□ 0.45
PCNP-206ENST00000486406 SAMD1Q6SPF0 538 aaPredicted RBP17.81■□□□□ 0.44
PCNP-206ENST00000486406 U3KPZ7 1027 aaPredicted RBP17.78■□□□□ 0.44
PCNP-206ENST00000486406 ATF5Q9Y2D1 282 aaPredicted RBP17.7■□□□□ 0.42
PCNP-206ENST00000486406 FKBP8Q14318 412 aa17.65■□□□□ 0.42
PCNP-206ENST00000486406 APLP2Q06481 763 aa17.52■□□□□ 0.4
PCNP-206ENST00000486406 ZNF219Q9P2Y4 722 aaPredicted RBP17.4■□□□□ 0.38
PCNP-206ENST00000486406 AMER1Q5JTC6 1135 aaPredicted RBP17.32■□□□□ 0.36
PCNP-206ENST00000486406 RTN4Q9NQC3 1192 aaKnown RBP17.25■□□□□ 0.35
PCNP-206ENST00000486406 NISCHQ9Y2I1 1504 aa17.13■□□□□ 0.33
PCNP-206ENST00000486406 RNF39Q9H2S5 420 aa17.12■□□□□ 0.33
PCNP-206ENST00000486406 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
PCNP-206ENST00000486406 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.32
PCNP-206ENST00000486406 CAPN15O75808 1086 aa17.02■□□□□ 0.32
PCNP-206ENST00000486406 FBLN2P98095 1184 aa17.01■□□□□ 0.31
PCNP-206ENST00000486406 C1QBPQ07021 282 aaKnown RBP16.99■□□□□ 0.31
PCNP-206ENST00000486406 SPDYE4A6NLX3 237 aa16.98■□□□□ 0.31
PCNP-206ENST00000486406 MKRN4PQ13434 485 aaPredicted RBP16.98■□□□□ 0.31
PCNP-206ENST00000486406 POLA2Q14181 598 aa16.97■□□□□ 0.31
PCNP-206ENST00000486406 FBXO3Q9UK99 471 aa16.87■□□□□ 0.29
PCNP-206ENST00000486406 ZBTB12Q9Y330 459 aaPredicted RBP16.78■□□□□ 0.28
PCNP-206ENST00000486406 PROM2Q8N271 834 aa16.75■□□□□ 0.27
PCNP-206ENST00000486406 SLC24A1O60721 1099 aa16.74■□□□□ 0.27
PCNP-206ENST00000486406 ABCB7O75027 752 aa16.74■□□□□ 0.27
PCNP-206ENST00000486406 VASPP50552 380 aaPredicted RBP16.59■□□□□ 0.25
PCNP-206ENST00000486406 DSG3P32926 999 aa16.53■□□□□ 0.24
PCNP-206ENST00000486406 ZNF692Q9BU19 519 aaPredicted RBP16.4■□□□□ 0.22
PCNP-206ENST00000486406 IFNLR1Q8IU57 520 aaPredicted RBP16.39■□□□□ 0.21
PCNP-206ENST00000486406 SPDYE2BA6NHP3 402 aa16.36■□□□□ 0.21
PCNP-206ENST00000486406 SPDYE6P0CI01 402 aa16.36■□□□□ 0.21
PCNP-206ENST00000486406 SPDYE2Q495Y8 402 aa16.36■□□□□ 0.21
PCNP-206ENST00000486406 OSCARQ8IYS5 282 aa16.36■□□□□ 0.21
PCNP-206ENST00000486406 SSUH2Q9Y2M2 353 aa16.27■□□□□ 0.2
PCNP-206ENST00000486406 STAG3Q9UJ98 1225 aa16.24■□□□□ 0.19
PCNP-206ENST00000486406 CACNB1Q02641 598 aaPredicted RBP16.21■□□□□ 0.19
PCNP-206ENST00000486406 PABPN1Q86U42 306 aaKnown RBP eCLIP16.2■□□□□ 0.18
PCNP-206ENST00000486406 KLHL34Q8N239 644 aa16.18■□□□□ 0.18
PCNP-206ENST00000486406 PLCD3Q8N3E9 789 aa16.12■□□□□ 0.17
PCNP-206ENST00000486406 SPOCK2Q92563 424 aa16.12■□□□□ 0.17
PCNP-206ENST00000486406 DCAF8L2P0C7V8 631 aa16.1■□□□□ 0.17
PCNP-206ENST00000486406 PKD2Q13563 968 aa16.1■□□□□ 0.17
PCNP-206ENST00000486406 ABCC9O60706 1549 aa16.06■□□□□ 0.16
PCNP-206ENST00000486406 MIER1Q8N108 512 aa16.05■□□□□ 0.16
PCNP-206ENST00000486406 PLCB2Q00722 1185 aa15.97■□□□□ 0.15
PCNP-206ENST00000486406 PLEKHG5O94827 1062 aa15.95■□□□□ 0.14
PCNP-206ENST00000486406 ECM2O94769 699 aaPredicted RBP15.92■□□□□ 0.14
PCNP-206ENST00000486406 ZBTB47Q9UFB7 747 aaPredicted RBP15.9■□□□□ 0.14
PCNP-206ENST00000486406 RBM42Q9BTD8 480 aaKnown RBP15.78■□□□□ 0.12
PCNP-206ENST00000486406 HAP1P54257 671 aaPredicted RBP15.77■□□□□ 0.12
PCNP-206ENST00000486406 CIZ1Q9ULV3 898 aaPredicted RBP15.76■□□□□ 0.11
PCNP-206ENST00000486406 SPDYE1Q8NFV5 336 aaPredicted RBP15.72■□□□□ 0.11
PCNP-206ENST00000486406 AKT1S1Q96B36 256 aa15.72■□□□□ 0.11
PCNP-206ENST00000486406 RGL2O15211 777 aa15.71■□□□□ 0.11
PCNP-206ENST00000486406 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.71■□□□□ 0.11
PCNP-206ENST00000486406 BBXQ8WY36 941 aaPredicted RBP15.7■□□□□ 0.1
PCNP-206ENST00000486406 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
PCNP-206ENST00000486406 NPM1P06748 294 aaKnown RBP eCLIP15.63■□□□□ 0.09
PCNP-206ENST00000486406 CLEC11AQ9Y240 323 aa15.62■□□□□ 0.09
PCNP-206ENST00000486406 CCDC180Q9P1Z9 1646 aa15.6■□□□□ 0.09
PCNP-206ENST00000486406 GSE1Q14687 1217 aa15.58■□□□□ 0.08
PCNP-206ENST00000486406 PRR29P0C7W0 189 aa15.57■□□□□ 0.08
PCNP-206ENST00000486406 PAXIP1Q6ZW49 1069 aaPredicted RBP15.56■□□□□ 0.08
PCNP-206ENST00000486406 REM2Q8IYK8 340 aaPredicted RBP15.55■□□□□ 0.08
PCNP-206ENST00000486406 VSIG10Q8N0Z9 540 aa15.53■□□□□ 0.08
PCNP-206ENST00000486406 NUBP1P53384 320 aa15.52■□□□□ 0.08
PCNP-206ENST00000486406 CFAP44Q96MT7 982 aa15.52■□□□□ 0.08
PCNP-206ENST00000486406 CHGAP10645 457 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms