RNA–Protein interactions for RNA: ENST00000567007.5

E2F4-208, Transcript of E2F transcription factor 4, humanhuman

TSL 2

Gene E2F4, Length 2,615 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F4-208ENST00000567007 NISCHQ9Y2I1 1504 aa43.69■■■■■ 4.58
E2F4-208ENST00000567007 CCDC180Q9P1Z9 1646 aa38.21■■■■□ 3.71
E2F4-208ENST00000567007 ABCC9O60706 1549 aa36.89■■■■□ 3.5
E2F4-208ENST00000567007 ZCCHC6Q5VYS8 1495 aaKnown RBP36.58■■■■□ 3.45
E2F4-208ENST00000567007 DCAF8L2P0C7V8 631 aa36.55■■■■□ 3.44
E2F4-208ENST00000567007 DCAF1Q9Y4B6 1507 aa35.94■■■■□ 3.34
E2F4-208ENST00000567007 NACADO15069 1562 aa35.72■■■■□ 3.31
E2F4-208ENST00000567007 MYO15BQ96JP2 1530 aa35.66■■■■□ 3.3
E2F4-208ENST00000567007 SHROOM4Q9ULL8 1493 aa35.61■■■■□ 3.29
E2F4-208ENST00000567007 RB1CC1Q8TDY2 1594 aa35.58■■■■□ 3.29
E2F4-208ENST00000567007 SCRIBQ14160 1630 aa35.33■■■■□ 3.25
E2F4-208ENST00000567007 UNC13AQ9UPW8 1703 aa35■■■■□ 3.19
E2F4-208ENST00000567007 PABPN1Q86U42 306 aaKnown RBP eCLIP34.77■■■■□ 3.16
E2F4-208ENST00000567007 BICRAQ9NZM4 1560 aa34.63■■■■□ 3.13
E2F4-208ENST00000567007 CECR2Q9BXF3 1484 aa34.15■■■■□ 3.06
E2F4-208ENST00000567007 SUPT5HO00267 1087 aaKnown RBP33.96■■■■□ 3.03
E2F4-208ENST00000567007 MROH2BQ7Z745 1585 aa33.84■■■■□ 3.01
E2F4-208ENST00000567007 RSF1Q96T23 1441 aaPredicted RBP33.75■■■□□ 2.99
E2F4-208ENST00000567007 BAZ1AQ9NRL2 1556 aaPredicted RBP33.72■■■□□ 2.99
E2F4-208ENST00000567007 SMARCA4P51532 1647 aa33.71■■■□□ 2.99
E2F4-208ENST00000567007 EIF4G1Q04637 1599 aaKnown RBP33.61■■■□□ 2.97
E2F4-208ENST00000567007 WIZO95785 1651 aa33.56■■■□□ 2.96
E2F4-208ENST00000567007 ATAD2BQ9ULI0 1458 aa33.29■■■□□ 2.92
E2F4-208ENST00000567007 CC2D2AQ9P2K1 1620 aa33.28■■■□□ 2.92
E2F4-208ENST00000567007 PEG3Q9GZU2 1588 aa33.2■■■□□ 2.9
E2F4-208ENST00000567007 SMARCA2P51531 1590 aa33.16■■■□□ 2.9
E2F4-208ENST00000567007 DNAJC5BQ9UF47 199 aa33.11■■■□□ 2.89
E2F4-208ENST00000567007 BAZ1BQ9UIG0 1483 aaKnown RBP33.08■■■□□ 2.89
E2F4-208ENST00000567007 TOP2AP11388 1531 aaKnown RBP33.05■■■□□ 2.88
E2F4-208ENST00000567007 NCAPD3P42695 1498 aa33.01■■■□□ 2.87
E2F4-208ENST00000567007 HMGXB3Q12766 1538 aa32.89■■■□□ 2.86
E2F4-208ENST00000567007 CCDC88BA6NC98 1476 aa32.79■■■□□ 2.84
E2F4-208ENST00000567007 NESP48681 1621 aa32.26■■■□□ 2.75
E2F4-208ENST00000567007 CADPSQ9ULU8 1353 aa32.18■■■□□ 2.74
E2F4-208ENST00000567007 CFTRP13569 1480 aa32.17■■■□□ 2.74
E2F4-208ENST00000567007 CHIC1Q5VXU3 224 aa32.11■■■□□ 2.73
E2F4-208ENST00000567007 ABCC8Q09428 1581 aa32.06■■■□□ 2.72
E2F4-208ENST00000567007 LAMC3Q9Y6N6 1575 aa31.96■■■□□ 2.71
E2F4-208ENST00000567007 PRDM2Q13029 1718 aa31.93■■■□□ 2.7
E2F4-208ENST00000567007 FANCD2Q9BXW9 1451 aa31.87■■■□□ 2.69
E2F4-208ENST00000567007 TRIM41Q8WV44 630 aa31.82■■■□□ 2.68
E2F4-208ENST00000567007 KIF21AQ7Z4S6 1674 aa31.79■■■□□ 2.68
E2F4-208ENST00000567007 WRNQ14191 1432 aaPredicted RBP eCLIP31.76■■■□□ 2.68
E2F4-208ENST00000567007 PDS5BQ9NTI5 1447 aa31.75■■■□□ 2.67
E2F4-208ENST00000567007 SYNJ1O43426 1573 aa31.72■■■□□ 2.67
E2F4-208ENST00000567007 CEP164Q9UPV0 1460 aa31.69■■■□□ 2.66
E2F4-208ENST00000567007 CUX1P39880 1505 aa31.65■■■□□ 2.66
E2F4-208ENST00000567007 ERCC6Q03468 1493 aa31.6■■■□□ 2.65
E2F4-208ENST00000567007 URB2Q14146 1524 aaKnown RBP31.54■■■□□ 2.64
E2F4-208ENST00000567007 TOP2BQ02880 1626 aa31.52■■■□□ 2.64
E2F4-208ENST00000567007 BIVM-ERCC5R4GMW8 1640 aa31.48■■■□□ 2.63
E2F4-208ENST00000567007 TOPBP1Q92547 1522 aa31.46■■■□□ 2.63
E2F4-208ENST00000567007 FAM9AQ8IZU1 332 aaPredicted RBP31.44■■■□□ 2.62
E2F4-208ENST00000567007 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
E2F4-208ENST00000567007 MRC2Q9UBG0 1479 aa31.41■■■□□ 2.62
E2F4-208ENST00000567007 FGD5Q6ZNL6 1462 aa31.38■■■□□ 2.61
E2F4-208ENST00000567007 THOC2Q8NI27 1593 aaKnown RBP31.33■■■□□ 2.61
E2F4-208ENST00000567007 SOGA1O94964 1423 aa31.33■■■□□ 2.61
E2F4-208ENST00000567007 RUSC2Q8N2Y8 1516 aa31.29■■■□□ 2.6
E2F4-208ENST00000567007 POLA1P09884 1462 aaPredicted RBP31.29■■■□□ 2.6
E2F4-208ENST00000567007 RAD54L2Q9Y4B4 1467 aa31.28■■■□□ 2.6
E2F4-208ENST00000567007 WDR62O43379 1518 aa31.24■■■□□ 2.59
E2F4-208ENST00000567007 EHMT2Q96KQ7 1210 aa31.17■■■□□ 2.58
E2F4-208ENST00000567007 CUX2O14529 1486 aa31.12■■■□□ 2.57
E2F4-208ENST00000567007 TDRD9Q8NDG6 1382 aaKnown RBP31.03■■■□□ 2.56
E2F4-208ENST00000567007 TARBP1Q13395 1621 aaKnown RBP31.03■■■□□ 2.56
E2F4-208ENST00000567007 LOC105371045A0A1W2PR82 267 aa31.02■■■□□ 2.56
E2F4-208ENST00000567007 ABCA10Q8WWZ4 1543 aa30.99■■■□□ 2.55
E2F4-208ENST00000567007 WDR97A6NE52 1622 aa30.97■■■□□ 2.55
E2F4-208ENST00000567007 KIF27Q86VH2 1401 aa30.96■■■□□ 2.55
E2F4-208ENST00000567007 ZNF608Q9ULD9 1512 aaPredicted RBP30.95■■■□□ 2.55
E2F4-208ENST00000567007 CSRNP3Q8WYN3 585 aa30.94■■■□□ 2.54
E2F4-208ENST00000567007 AQRO60306 1485 aaKnown RBP eCLIP30.91■■■□□ 2.542e-7■■■■■ 36.2
E2F4-208ENST00000567007 IFT140Q96RY7 1462 aa30.91■■■□□ 2.54
E2F4-208ENST00000567007 EEA1Q15075 1411 aa30.86■■■□□ 2.53
E2F4-208ENST00000567007 ABCA5Q8WWZ7 1642 aa30.82■■■□□ 2.52
E2F4-208ENST00000567007 GAPVD1Q14C86 1478 aa30.81■■■□□ 2.52
E2F4-208ENST00000567007 IGF1RP08069 1367 aa30.8■■■□□ 2.52
E2F4-208ENST00000567007 EIF4G3O43432 1585 aaKnown RBP30.75■■■□□ 2.51
E2F4-208ENST00000567007 PBRM1Q86U86 1689 aa30.68■■■□□ 2.5
E2F4-208ENST00000567007 RAPGEF2Q9Y4G8 1499 aa30.67■■■□□ 2.5
E2F4-208ENST00000567007 PRXQ9BXM0 1461 aa30.63■■■□□ 2.49
E2F4-208ENST00000567007 CARMIL1Q5VZK9 1371 aa30.63■■■□□ 2.49
E2F4-208ENST00000567007 GRIN2BQ13224 1484 aa30.6■■■□□ 2.49
E2F4-208ENST00000567007 ERICH3Q5RHP9 1530 aa30.59■■■□□ 2.49
E2F4-208ENST00000567007 UBTFP17480 764 aaKnown RBP30.59■■■□□ 2.49
E2F4-208ENST00000567007 KIF21BO75037 1637 aa30.58■■■□□ 2.49
E2F4-208ENST00000567007 SNAPC4Q5SXM2 1469 aa30.56■■■□□ 2.48
E2F4-208ENST00000567007 GOLGA3Q08378 1498 aa30.55■■■□□ 2.48
E2F4-208ENST00000567007 CUL7Q14999 1698 aa30.49■■■□□ 2.47
E2F4-208ENST00000567007 RANGAP1P46060 587 aaPredicted RBP30.47■■■□□ 2.47
E2F4-208ENST00000567007 ADAMTS12P58397 1594 aa30.46■■■□□ 2.47
E2F4-208ENST00000567007 FBLN2P98095 1184 aa30.45■■■□□ 2.46
E2F4-208ENST00000567007 FHAD1B1AJZ9 1412 aa30.41■■■□□ 2.46
E2F4-208ENST00000567007 MAGI1Q96QZ7 1491 aaPredicted RBP30.36■■■□□ 2.45
E2F4-208ENST00000567007 CHMP7Q8WUX9 453 aaPredicted RBP30.34■■■□□ 2.45
E2F4-208ENST00000567007 TNIKQ9UKE5 1360 aa30.33■■■□□ 2.45
E2F4-208ENST00000567007 SYNJ2O15056 1496 aa30.29■■■□□ 2.44
E2F4-208ENST00000567007 GRIN2AQ12879 1464 aa30.26■■■□□ 2.44
E2F4-208ENST00000567007 CEP162Q5TB80 1403 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms