RNA–Protein interactions for RNA: ENST00000582436.5

PHF12-209, Transcript of PHD finger protein 12, humanhuman

TSL 5

Gene PHF12, Length 5,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF12-209ENST00000582436 DCAF8L2P0C7V8 631 aa13.58□□□□□ -0.23
PHF12-209ENST00000582436 PELP1Q8IZL8 1130 aaKnown RBP13.54□□□□□ -0.24
PHF12-209ENST00000582436 ERICH6Q7L0X2 663 aa12.98□□□□□ -0.33
PHF12-209ENST00000582436 CCER1Q8TC90 406 aaPredicted RBP12.92□□□□□ -0.34
PHF12-209ENST00000582436 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
PHF12-209ENST00000582436 APLP2Q06481 763 aa12.79□□□□□ -0.36
PHF12-209ENST00000582436 FAM9AQ8IZU1 332 aaPredicted RBP12.73□□□□□ -0.37
PHF12-209ENST00000582436 EHMT2Q96KQ7 1210 aa12.68□□□□□ -0.38
PHF12-209ENST00000582436 CENPBP07199 599 aaPredicted RBP12.58□□□□□ -0.39
PHF12-209ENST00000582436 MYT1Q01538 1121 aa12.58□□□□□ -0.4
PHF12-209ENST00000582436 NEFLP07196 543 aa12.46□□□□□ -0.41
PHF12-209ENST00000582436 DAXXQ9UER7 740 aaPredicted RBP12.35□□□□□ -0.43
PHF12-209ENST00000582436 YTHDC1Q96MU7 727 aaKnown RBP12.34□□□□□ -0.43
PHF12-209ENST00000582436 PCGF6Q9BYE7 350 aa12.31□□□□□ -0.44
PHF12-209ENST00000582436 TTBK1Q5TCY1 1321 aaPredicted RBP12.3□□□□□ -0.44
PHF12-209ENST00000582436 ZEB1P37275 1124 aaPredicted RBP12.27□□□□□ -0.44
PHF12-209ENST00000582436 SHROOM4Q9ULL8 1493 aa12.21□□□□□ -0.45
PHF12-209ENST00000582436 ATP1B4Q9UN42 357 aaPredicted RBP12.18□□□□□ -0.46
PHF12-209ENST00000582436 RANGAP1P46060 587 aaPredicted RBP12.12□□□□□ -0.47
PHF12-209ENST00000582436 RTL5Q5HYW3 569 aaPredicted RBP11.98□□□□□ -0.49
PHF12-209ENST00000582436 ZNF316A6NFI3 1004 aaPredicted RBP11.98□□□□□ -0.49
PHF12-209ENST00000582436 POLR3GLQ9BT43 218 aa11.91□□□□□ -0.5
PHF12-209ENST00000582436 MYT1LQ9UL68 1186 aa11.91□□□□□ -0.5
PHF12-209ENST00000582436 CLSPNQ9HAW4 1339 aa11.9□□□□□ -0.5
PHF12-209ENST00000582436 UBTFP17480 764 aaKnown RBP11.89□□□□□ -0.51
PHF12-209ENST00000582436 TRIM41Q8WV44 630 aa11.84□□□□□ -0.51
PHF12-209ENST00000582436 SLC4A1APQ9BWU0 796 aaKnown RBP11.78□□□□□ -0.52
PHF12-209ENST00000582436 CNGB1Q14028 1251 aaPredicted RBP11.72□□□□□ -0.53
PHF12-209ENST00000582436 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.54
PHF12-209ENST00000582436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
PHF12-209ENST00000582436 HNRNPUL2Q1KMD3 747 aaKnown RBP11.7□□□□□ -0.54
PHF12-209ENST00000582436 CHIC1Q5VXU3 224 aa11.65□□□□□ -0.54
PHF12-209ENST00000582436 ITGAEP38570 1179 aa11.63□□□□□ -0.55
PHF12-209ENST00000582436 PPARGC1BQ86YN6 1023 aaKnown RBP11.56□□□□□ -0.56
PHF12-209ENST00000582436 TRIM26Q12899 539 aaPredicted RBP11.53□□□□□ -0.56
PHF12-209ENST00000582436 HRCP23327 699 aa11.52□□□□□ -0.56
PHF12-209ENST00000582436 ANP32BQ92688 251 aaKnown RBP11.49□□□□□ -0.57
PHF12-209ENST00000582436 CDK11AQ9UQ88 783 aaPredicted RBP11.49□□□□□ -0.57
PHF12-209ENST00000582436 SLC24A1O60721 1099 aa11.48□□□□□ -0.57
PHF12-209ENST00000582436 GLIPR1L2Q4G1C9 344 aa11.45□□□□□ -0.58
PHF12-209ENST00000582436 CANXP27824 592 aaKnown RBP11.45□□□□□ -0.58
PHF12-209ENST00000582436 BCL11AQ9H165 835 aa11.44□□□□□ -0.58
PHF12-209ENST00000582436 NEFMP07197 916 aa11.42□□□□□ -0.58
PHF12-209ENST00000582436 EIF5BO60841 1220 aaKnown RBP11.42□□□□□ -0.58
PHF12-209ENST00000582436 NISCHQ9Y2I1 1504 aa11.4□□□□□ -0.59
PHF12-209ENST00000582436 BCANQ96GW7 911 aa11.37□□□□□ -0.59
PHF12-209ENST00000582436 ANP32AP39687 249 aaKnown RBP11.36□□□□□ -0.59
PHF12-209ENST00000582436 DIEXFQ68CQ4 756 aaKnown RBP11.35□□□□□ -0.59
PHF12-209ENST00000582436 TRIM52Q96A61 297 aa11.33□□□□□ -0.6
PHF12-209ENST00000582436 CDK11BP21127 795 aaKnown RBP11.32□□□□□ -0.6
PHF12-209ENST00000582436 ANP32CO43423 234 aa11.31□□□□□ -0.6
PHF12-209ENST00000582436 HSP90AA1P07900 732 aaKnown RBP11.31□□□□□ -0.6
PHF12-209ENST00000582436 FAM50AQ14320 339 aaKnown RBP11.25□□□□□ -0.61
PHF12-209ENST00000582436 ZNF326Q5BKZ1 582 aaKnown RBP11.24□□□□□ -0.61
PHF12-209ENST00000582436 NPM2Q86SE8 214 aaKnown RBP11.23□□□□□ -0.61
PHF12-209ENST00000582436 UPF2Q9HAU5 1272 aaKnown RBP11.23□□□□□ -0.61
PHF12-209ENST00000582436 NEUROD1Q13562 356 aa11.22□□□□□ -0.61
PHF12-209ENST00000582436 GTF3C3Q9Y5Q9 886 aa11.19□□□□□ -0.62
PHF12-209ENST00000582436 TNNT2P45379 298 aaPredicted RBP11.1□□□□□ -0.63
PHF12-209ENST00000582436 LOC105371045A0A1W2PR82 267 aa11.03□□□□□ -0.64
PHF12-209ENST00000582436 ARXQ96QS3 562 aa11.03□□□□□ -0.64
PHF12-209ENST00000582436 ESF1Q9H501 851 aaKnown RBP11.03□□□□□ -0.64
PHF12-209ENST00000582436 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.02□□□□□ -0.64
PHF12-209ENST00000582436 NCLP19338 710 aaKnown RBP11.01□□□□□ -0.65
PHF12-209ENST00000582436 TRIM44Q96DX7 344 aaPredicted RBP10.98□□□□□ -0.65
PHF12-209ENST00000582436 ZRSR1Q15695 479 aaKnown RBP10.96□□□□□ -0.66
PHF12-209ENST00000582436 ANP32EQ9BTT0 268 aa10.96□□□□□ -0.66
PHF12-209ENST00000582436 STAG3Q9UJ98 1225 aa10.96□□□□□ -0.66
PHF12-209ENST00000582436 NBR1Q14596 966 aa10.95□□□□□ -0.66
PHF12-209ENST00000582436 MYH16Q9H6N6 1097 aa10.95□□□□□ -0.66
PHF12-209ENST00000582436 FKBP8Q14318 412 aa10.93□□□□□ -0.66
PHF12-209ENST00000582436 GOLGA6L22H0YM25 854 aa10.92□□□□□ -0.66
PHF12-209ENST00000582436 CCDC136Q96JN2 1154 aa10.91□□□□□ -0.66
PHF12-209ENST00000582436 PTMAP06454 111 aaKnown RBP10.9□□□□□ -0.66
PHF12-209ENST00000582436 ACIN1Q9UKV3 1341 aaKnown RBP10.9□□□□□ -0.66
PHF12-209ENST00000582436 FBLN2P98095 1184 aa10.9□□□□□ -0.67
PHF12-209ENST00000582436 CHGAP10645 457 aaKnown RBP10.89□□□□□ -0.67
PHF12-209ENST00000582436 DNTTIP2Q5QJE6 756 aaKnown RBP10.89□□□□□ -0.67
PHF12-209ENST00000582436 A0A0G2JS52 829 aa10.88□□□□□ -0.67
PHF12-209ENST00000582436 TULP1O00294 542 aaPredicted RBP10.88□□□□□ -0.67
PHF12-209ENST00000582436 BECN1Q14457 450 aa10.88□□□□□ -0.67
PHF12-209ENST00000582436 HNRNPUQ00839 825 aaKnown RBP eCLIP10.86□□□□□ -0.67
PHF12-209ENST00000582436 WDR43Q15061 677 aaKnown RBP eCLIP10.84□□□□□ -0.67
PHF12-209ENST00000582436 SCAF1Q9H7N4 1312 aaKnown RBP10.84□□□□□ -0.67
PHF12-209ENST00000582436 DDRGK1Q96HY6 314 aa10.84□□□□□ -0.67
PHF12-209ENST00000582436 SALL2Q9Y467 1007 aaPredicted RBP10.84□□□□□ -0.67
PHF12-209ENST00000582436 FAM9BQ8IZU0 186 aa10.84□□□□□ -0.67
PHF12-209ENST00000582436 ZNF777Q9ULD5 760 aaPredicted RBP10.83□□□□□ -0.68
PHF12-209ENST00000582436 PLPPR3Q6T4P5 718 aa10.82□□□□□ -0.68
PHF12-209ENST00000582436 GOLGA6L6A8MZA4 724 aa10.82□□□□□ -0.68
PHF12-209ENST00000582436 TMC1Q8TDI8 760 aa10.81□□□□□ -0.68
PHF12-209ENST00000582436 NRDCO43847 1150 aa10.79□□□□□ -0.68
PHF12-209ENST00000582436 ERICH6BQ5W0A0 696 aa10.79□□□□□ -0.68
PHF12-209ENST00000582436 CASC1Q6TDU7 716 aa10.78□□□□□ -0.68
PHF12-209ENST00000582436 TONSLQ96HA7 1378 aa10.76□□□□□ -0.69
PHF12-209ENST00000582436 NCBP3Q53F19 620 aaKnown RBP10.76□□□□□ -0.69
PHF12-209ENST00000582436 NAP1L5Q96NT1 182 aaPredicted RBP10.75□□□□□ -0.69
PHF12-209ENST00000582436 ARID3CA6NKF2 412 aa10.75□□□□□ -0.69
PHF12-209ENST00000582436 L1TD1Q5T7N2 865 aaKnown RBP10.74□□□□□ -0.69
PHF12-209ENST00000582436 ZBTB7CA1YPR0 619 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms