RNA–Protein interactions for RNA: ENST00000378116.8

FAM171A1-201, Transcript of family with sequence similarity 171 member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM171A1, Length 3,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM171A1-201ENST00000378116 NISCHQ9Y2I1 1504 aa18.98■□□□□ 0.63
FAM171A1-201ENST00000378116 SHROOM4Q9ULL8 1493 aa17.1■□□□□ 0.33
FAM171A1-201ENST00000378116 SUPT5HO00267 1087 aaKnown RBP16.87■□□□□ 0.29
FAM171A1-201ENST00000378116 DCAF8L2P0C7V8 631 aa16.81■□□□□ 0.28
FAM171A1-201ENST00000378116 CHIC1Q5VXU3 224 aa16.03■□□□□ 0.16
FAM171A1-201ENST00000378116 ZCCHC6Q5VYS8 1495 aaKnown RBP15.98■□□□□ 0.15
FAM171A1-201ENST00000378116 PCGF6Q9BYE7 350 aa15.98■□□□□ 0.15
FAM171A1-201ENST00000378116 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
FAM171A1-201ENST00000378116 MYO15BQ96JP2 1530 aa15.89■□□□□ 0.13
FAM171A1-201ENST00000378116 LOC105371045A0A1W2PR82 267 aa15.87■□□□□ 0.13
FAM171A1-201ENST00000378116 PPARGC1BQ86YN6 1023 aaKnown RBP15.74■□□□□ 0.11
FAM171A1-201ENST00000378116 FAM9AQ8IZU1 332 aaPredicted RBP15.72■□□□□ 0.11
FAM171A1-201ENST00000378116 CCDC180Q9P1Z9 1646 aa15.7■□□□□ 0.1
FAM171A1-201ENST00000378116 HRCP23327 699 aa15.7■□□□□ 0.1
FAM171A1-201ENST00000378116 TRIM41Q8WV44 630 aa15.49■□□□□ 0.07
FAM171A1-201ENST00000378116 SCRIBQ14160 1630 aa15.34■□□□□ 0.05
FAM171A1-201ENST00000378116 TTBK1Q5TCY1 1321 aaPredicted RBP15.34■□□□□ 0.05
FAM171A1-201ENST00000378116 TRIM26Q12899 539 aaPredicted RBP15.32■□□□□ 0.04
FAM171A1-201ENST00000378116 ABCC9O60706 1549 aa15.3■□□□□ 0.04
FAM171A1-201ENST00000378116 RSF1Q96T23 1441 aaPredicted RBP15.21■□□□□ 0.03
FAM171A1-201ENST00000378116 DCAF1Q9Y4B6 1507 aa15.19■□□□□ 0.02
FAM171A1-201ENST00000378116 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
FAM171A1-201ENST00000378116 RB1CC1Q8TDY2 1594 aa15.06■□□□□ 0
FAM171A1-201ENST00000378116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
FAM171A1-201ENST00000378116 CCER1Q8TC90 406 aaPredicted RBP14.95□□□□□ -0.02
FAM171A1-201ENST00000378116 RANGAP1P46060 587 aaPredicted RBP14.94□□□□□ -0.02
FAM171A1-201ENST00000378116 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
FAM171A1-201ENST00000378116 ZEB1P37275 1124 aaPredicted RBP14.91□□□□□ -0.02
FAM171A1-201ENST00000378116 MROH2BQ7Z745 1585 aa14.91□□□□□ -0.02
FAM171A1-201ENST00000378116 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
FAM171A1-201ENST00000378116 WIZO95785 1651 aa14.8□□□□□ -0.04
FAM171A1-201ENST00000378116 NACADO15069 1562 aa14.7□□□□□ -0.06
FAM171A1-201ENST00000378116 ABCC8Q09428 1581 aa14.69□□□□□ -0.06
FAM171A1-201ENST00000378116 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
FAM171A1-201ENST00000378116 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
FAM171A1-201ENST00000378116 CCDC88BA6NC98 1476 aa14.64□□□□□ -0.07
FAM171A1-201ENST00000378116 SOGA1O94964 1423 aa14.63□□□□□ -0.07
FAM171A1-201ENST00000378116 YTHDC1Q96MU7 727 aaKnown RBP14.62□□□□□ -0.07
FAM171A1-201ENST00000378116 CSRNP3Q8WYN3 585 aa14.61□□□□□ -0.07
FAM171A1-201ENST00000378116 DIEXFQ68CQ4 756 aaKnown RBP14.58□□□□□ -0.08
FAM171A1-201ENST00000378116 RUSC2Q8N2Y8 1516 aa14.54□□□□□ -0.08
FAM171A1-201ENST00000378116 BAZ1AQ9NRL2 1556 aaPredicted RBP14.54□□□□□ -0.08
FAM171A1-201ENST00000378116 APLP2Q06481 763 aa14.54□□□□□ -0.08
FAM171A1-201ENST00000378116 CEP162Q5TB80 1403 aa14.54□□□□□ -0.08
FAM171A1-201ENST00000378116 NEUROD1Q13562 356 aa14.5□□□□□ -0.09
FAM171A1-201ENST00000378116 GTF3C3Q9Y5Q9 886 aa14.43□□□□□ -0.1
FAM171A1-201ENST00000378116 ACIN1Q9UKV3 1341 aaKnown RBP14.41□□□□□ -0.1
FAM171A1-201ENST00000378116 ITGAEP38570 1179 aa14.41□□□□□ -0.1
FAM171A1-201ENST00000378116 CENPBP07199 599 aaPredicted RBP14.4□□□□□ -0.1
FAM171A1-201ENST00000378116 TOP2AP11388 1531 aaKnown RBP14.4□□□□□ -0.1
FAM171A1-201ENST00000378116 SMARCA4P51532 1647 aa14.39□□□□□ -0.11
FAM171A1-201ENST00000378116 TNIKQ9UKE5 1360 aa14.37□□□□□ -0.11
FAM171A1-201ENST00000378116 SMARCA2P51531 1590 aa14.37□□□□□ -0.11
FAM171A1-201ENST00000378116 WRNQ14191 1432 aaPredicted RBP eCLIP14.37□□□□□ -0.11
FAM171A1-201ENST00000378116 ZNF316A6NFI3 1004 aaPredicted RBP14.33□□□□□ -0.12
FAM171A1-201ENST00000378116 GOLGA3Q08378 1498 aa14.29□□□□□ -0.12
FAM171A1-201ENST00000378116 CLIP1P30622 1438 aa14.29□□□□□ -0.12
FAM171A1-201ENST00000378116 ATP1B4Q9UN42 357 aaPredicted RBP14.29□□□□□ -0.12
FAM171A1-201ENST00000378116 MIER1Q8N108 512 aa14.27□□□□□ -0.12
FAM171A1-201ENST00000378116 EIF4G1Q04637 1599 aaKnown RBP14.26□□□□□ -0.13
FAM171A1-201ENST00000378116 PELP1Q8IZL8 1130 aaKnown RBP14.23□□□□□ -0.13
FAM171A1-201ENST00000378116 EEA1Q15075 1411 aa14.2□□□□□ -0.14
FAM171A1-201ENST00000378116 BAZ1BQ9UIG0 1483 aaKnown RBP14.2□□□□□ -0.14
FAM171A1-201ENST00000378116 RAPGEF2Q9Y4G8 1499 aa14.19□□□□□ -0.14
FAM171A1-201ENST00000378116 CEP164Q9UPV0 1460 aa14.17□□□□□ -0.14
FAM171A1-201ENST00000378116 UNC13AQ9UPW8 1703 aa14.16□□□□□ -0.14
FAM171A1-201ENST00000378116 KANK4Q5T7N3 995 aaPredicted RBP14.16□□□□□ -0.14
FAM171A1-201ENST00000378116 P3H3Q8IVL6 736 aa14.16□□□□□ -0.14
FAM171A1-201ENST00000378116 SYNJ1O43426 1573 aa14.15□□□□□ -0.14
FAM171A1-201ENST00000378116 ATAD2BQ9ULI0 1458 aa14.13□□□□□ -0.15
FAM171A1-201ENST00000378116 BICRAQ9NZM4 1560 aa14.1□□□□□ -0.15
FAM171A1-201ENST00000378116 VPS8Q8N3P4 1428 aa14.09□□□□□ -0.15
FAM171A1-201ENST00000378116 FAM50AQ14320 339 aaKnown RBP14.05□□□□□ -0.16
FAM171A1-201ENST00000378116 HIRIP3Q9BW71 556 aaPredicted RBP14□□□□□ -0.17
FAM171A1-201ENST00000378116 KIF21BO75037 1637 aa13.97□□□□□ -0.17
FAM171A1-201ENST00000378116 BCANQ96GW7 911 aa13.91□□□□□ -0.18
FAM171A1-201ENST00000378116 SIN3AQ96ST3 1273 aa13.91□□□□□ -0.18
FAM171A1-201ENST00000378116 DHX57Q6P158 1386 aaKnown RBP13.91□□□□□ -0.18
FAM171A1-201ENST00000378116 KIF27Q86VH2 1401 aa13.91□□□□□ -0.18
FAM171A1-201ENST00000378116 KCNH8Q96L42 1107 aa13.9□□□□□ -0.18
FAM171A1-201ENST00000378116 ARAP1Q96P48 1450 aa13.89□□□□□ -0.19
FAM171A1-201ENST00000378116 ARID3CA6NKF2 412 aa13.88□□□□□ -0.19
FAM171A1-201ENST00000378116 DDX10Q13206 875 aaKnown RBP13.87□□□□□ -0.19
FAM171A1-201ENST00000378116 CUX2O14529 1486 aa13.86□□□□□ -0.19
FAM171A1-201ENST00000378116 CCNB3Q8WWL7 1395 aa13.85□□□□□ -0.19
FAM171A1-201ENST00000378116 PEG3Q9GZU2 1588 aa13.83□□□□□ -0.2
FAM171A1-201ENST00000378116 CUX1P39880 1505 aa13.82□□□□□ -0.2
FAM171A1-201ENST00000378116 TOP2BQ02880 1626 aa13.81□□□□□ -0.2
FAM171A1-201ENST00000378116 PRXQ9BXM0 1461 aa13.81□□□□□ -0.2
FAM171A1-201ENST00000378116 RAB3GAP2Q9H2M9 1393 aa13.79□□□□□ -0.2
FAM171A1-201ENST00000378116 CARMIL1Q5VZK9 1371 aa13.78□□□□□ -0.2
FAM171A1-201ENST00000378116 CNGB1Q14028 1251 aaPredicted RBP13.77□□□□□ -0.21
FAM171A1-201ENST00000378116 ARHGAP35Q9NRY4 1499 aa13.76□□□□□ -0.21
FAM171A1-201ENST00000378116 IGF1RP08069 1367 aa13.75□□□□□ -0.21
FAM171A1-201ENST00000378116 TRIM52Q96A61 297 aa13.75□□□□□ -0.21
FAM171A1-201ENST00000378116 SUPT16HQ9Y5B9 1047 aaKnown RBP13.73□□□□□ -0.21
FAM171A1-201ENST00000378116 CHIC2Q9UKJ5 165 aa13.72□□□□□ -0.21
FAM171A1-201ENST00000378116 NCAPD3P42695 1498 aa13.72□□□□□ -0.21
FAM171A1-201ENST00000378116 CLSPNQ9HAW4 1339 aa13.7□□□□□ -0.22
FAM171A1-201ENST00000378116 FHOD3Q2V2M9 1422 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms