RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 NISCHQ9Y2I1 1504 aa43.24■■■■■ 4.51
SLC9A3R1-203ENST00000578958 CCDC180Q9P1Z9 1646 aa38.67■■■■□ 3.78
SLC9A3R1-203ENST00000578958 ABCC9O60706 1549 aa38.53■■■■□ 3.76
SLC9A3R1-203ENST00000578958 RB1CC1Q8TDY2 1594 aa36.77■■■■□ 3.48
SLC9A3R1-203ENST00000578958 DCAF8L2P0C7V8 631 aa36.65■■■■□ 3.46
SLC9A3R1-203ENST00000578958 NACADO15069 1562 aa36.56■■■■□ 3.44
SLC9A3R1-203ENST00000578958 MYO15BQ96JP2 1530 aa36.08■■■■□ 3.37
SLC9A3R1-203ENST00000578958 PABPN1Q86U42 306 aaKnown RBP eCLIP35.97■■■■□ 3.35
SLC9A3R1-203ENST00000578958 DNAJC5BQ9UF47 199 aa35.87■■■■□ 3.33
SLC9A3R1-203ENST00000578958 ZCCHC6Q5VYS8 1495 aaKnown RBP35.86■■■■□ 3.33
SLC9A3R1-203ENST00000578958 UNC13AQ9UPW8 1703 aa35.81■■■■□ 3.32
SLC9A3R1-203ENST00000578958 DCAF1Q9Y4B6 1507 aa35.7■■■■□ 3.31
SLC9A3R1-203ENST00000578958 BICRAQ9NZM4 1560 aa35.58■■■■□ 3.29
SLC9A3R1-203ENST00000578958 SCRIBQ14160 1630 aa35.32■■■■□ 3.24
SLC9A3R1-203ENST00000578958 SHROOM4Q9ULL8 1493 aa35.19■■■■□ 3.22
SLC9A3R1-203ENST00000578958 CC2D2AQ9P2K1 1620 aa34.77■■■■□ 3.16
SLC9A3R1-203ENST00000578958 EIF4G1Q04637 1599 aaKnown RBP34.75■■■■□ 3.15
SLC9A3R1-203ENST00000578958 CECR2Q9BXF3 1484 aa34.69■■■■□ 3.14
SLC9A3R1-203ENST00000578958 NCAPD3P42695 1498 aa33.73■■■□□ 2.99
SLC9A3R1-203ENST00000578958 SMARCA4P51532 1647 aa33.68■■■□□ 2.98
SLC9A3R1-203ENST00000578958 ATAD2BQ9ULI0 1458 aa33.66■■■□□ 2.98
SLC9A3R1-203ENST00000578958 SMARCA2P51531 1590 aa33.62■■■□□ 2.97
SLC9A3R1-203ENST00000578958 BAZ1AQ9NRL2 1556 aaPredicted RBP33.59■■■□□ 2.97
SLC9A3R1-203ENST00000578958 HMGXB3Q12766 1538 aa33.48■■■□□ 2.95
SLC9A3R1-203ENST00000578958 BAZ1BQ9UIG0 1483 aaKnown RBP33.41■■■□□ 2.94
SLC9A3R1-203ENST00000578958 ERCC6Q03468 1493 aa33.34■■■□□ 2.93
SLC9A3R1-203ENST00000578958 MROH2BQ7Z745 1585 aa33.31■■■□□ 2.92
SLC9A3R1-203ENST00000578958 PEG3Q9GZU2 1588 aa33.3■■■□□ 2.92
SLC9A3R1-203ENST00000578958 NESP48681 1621 aa33.13■■■□□ 2.89
SLC9A3R1-203ENST00000578958 CUX2O14529 1486 aa33.11■■■□□ 2.89
SLC9A3R1-203ENST00000578958 LAMC3Q9Y6N6 1575 aa32.95■■■□□ 2.86
SLC9A3R1-203ENST00000578958 WIZO95785 1651 aa32.93■■■□□ 2.86
SLC9A3R1-203ENST00000578958 DNAJC5Q9H3Z4 198 aa32.84■■■□□ 2.85
SLC9A3R1-203ENST00000578958 PDS5BQ9NTI5 1447 aa32.83■■■□□ 2.85
SLC9A3R1-203ENST00000578958 CADPSQ9ULU8 1353 aa32.77■■■□□ 2.84
SLC9A3R1-203ENST00000578958 RSF1Q96T23 1441 aaPredicted RBP32.73■■■□□ 2.83
SLC9A3R1-203ENST00000578958 THOC2Q8NI27 1593 aaKnown RBP32.69■■■□□ 2.82
SLC9A3R1-203ENST00000578958 KIF21AQ7Z4S6 1674 aa32.68■■■□□ 2.82
SLC9A3R1-203ENST00000578958 TOP2AP11388 1531 aaKnown RBP32.54■■■□□ 2.8
SLC9A3R1-203ENST00000578958 MRC2Q9UBG0 1479 aa32.48■■■□□ 2.79
SLC9A3R1-203ENST00000578958 CEP164Q9UPV0 1460 aa32.42■■■□□ 2.78
SLC9A3R1-203ENST00000578958 CFTRP13569 1480 aa32.4■■■□□ 2.78
SLC9A3R1-203ENST00000578958 FANCD2Q9BXW9 1451 aa32.39■■■□□ 2.78
SLC9A3R1-203ENST00000578958 WDR62O43379 1518 aa32.34■■■□□ 2.77
SLC9A3R1-203ENST00000578958 CCDC88BA6NC98 1476 aa32.19■■■□□ 2.74
SLC9A3R1-203ENST00000578958 URB2Q14146 1524 aaKnown RBP32.05■■■□□ 2.72
SLC9A3R1-203ENST00000578958 PRDM2Q13029 1718 aa32.04■■■□□ 2.72
SLC9A3R1-203ENST00000578958 ABCC8Q09428 1581 aa31.78■■■□□ 2.68
SLC9A3R1-203ENST00000578958 TOPBP1Q92547 1522 aa31.77■■■□□ 2.68
SLC9A3R1-203ENST00000578958 IFT140Q96RY7 1462 aa31.76■■■□□ 2.67
SLC9A3R1-203ENST00000578958 OSCARQ8IYS5 282 aa31.73■■■□□ 2.67
SLC9A3R1-203ENST00000578958 DNMBPQ6XZF7 1577 aa31.68■■■□□ 2.66
SLC9A3R1-203ENST00000578958 SUPT5HO00267 1087 aaKnown RBP31.63■■■□□ 2.65
SLC9A3R1-203ENST00000578958 ZNF608Q9ULD9 1512 aaPredicted RBP31.63■■■□□ 2.65
SLC9A3R1-203ENST00000578958 TRIM41Q8WV44 630 aa31.62■■■□□ 2.65
SLC9A3R1-203ENST00000578958 POLA1P09884 1462 aaPredicted RBP31.46■■■□□ 2.63
SLC9A3R1-203ENST00000578958 EIF4G3O43432 1585 aaKnown RBP31.46■■■□□ 2.63
SLC9A3R1-203ENST00000578958 TARBP1Q13395 1621 aaKnown RBP31.42■■■□□ 2.62
SLC9A3R1-203ENST00000578958 AQRO60306 1485 aaKnown RBP eCLIP31.42■■■□□ 2.625e-8■■■■■ 30.2
SLC9A3R1-203ENST00000578958 SOGA1O94964 1423 aa31.4■■■□□ 2.62
SLC9A3R1-203ENST00000578958 RAD54L2Q9Y4B4 1467 aa31.36■■■□□ 2.61
SLC9A3R1-203ENST00000578958 FBLN2P98095 1184 aa31.32■■■□□ 2.6
SLC9A3R1-203ENST00000578958 FGD5Q6ZNL6 1462 aa31.32■■■□□ 2.6
SLC9A3R1-203ENST00000578958 TDRD9Q8NDG6 1382 aaKnown RBP31.29■■■□□ 2.6
SLC9A3R1-203ENST00000578958 CUX1P39880 1505 aa31.29■■■□□ 2.6
SLC9A3R1-203ENST00000578958 CHD1O14646 1710 aa31.18■■■□□ 2.58
SLC9A3R1-203ENST00000578958 WDR97A6NE52 1622 aa31.16■■■□□ 2.58
SLC9A3R1-203ENST00000578958 RIMBP3CA6NJZ7 1639 aa31.16■■■□□ 2.58
SLC9A3R1-203ENST00000578958 RIMBP3BA6NNM3 1639 aa31.16■■■□□ 2.58
SLC9A3R1-203ENST00000578958 RIMBP3Q9UFD9 1639 aa31.16■■■□□ 2.58
SLC9A3R1-203ENST00000578958 ARHGEF11O15085 1522 aa31.1■■■□□ 2.57
SLC9A3R1-203ENST00000578958 SNAPC4Q5SXM2 1469 aa31.1■■■□□ 2.57
SLC9A3R1-203ENST00000578958 CHMP7Q8WUX9 453 aaPredicted RBP31.1■■■□□ 2.57
SLC9A3R1-203ENST00000578958 GRIN2BQ13224 1484 aa31.08■■■□□ 2.57
SLC9A3R1-203ENST00000578958 MAGI1Q96QZ7 1491 aaPredicted RBP31.03■■■□□ 2.56
SLC9A3R1-203ENST00000578958 GAPVD1Q14C86 1478 aa31■■■□□ 2.55
SLC9A3R1-203ENST00000578958 CYB5RLQ6IPT4 315 aa30.98■■■□□ 2.55
SLC9A3R1-203ENST00000578958 ABCA10Q8WWZ4 1543 aa30.96■■■□□ 2.55
SLC9A3R1-203ENST00000578958 WRNQ14191 1432 aaPredicted RBP eCLIP30.96■■■□□ 2.55
SLC9A3R1-203ENST00000578958 SYNJ2O15056 1496 aa30.93■■■□□ 2.54
SLC9A3R1-203ENST00000578958 SYNJ1O43426 1573 aa30.91■■■□□ 2.54
SLC9A3R1-203ENST00000578958 PBRM1Q86U86 1689 aa30.9■■■□□ 2.54
SLC9A3R1-203ENST00000578958 TOP2BQ02880 1626 aa30.86■■■□□ 2.53
SLC9A3R1-203ENST00000578958 ABCA5Q8WWZ7 1642 aa30.84■■■□□ 2.53
SLC9A3R1-203ENST00000578958 BIVM-ERCC5R4GMW8 1640 aa30.84■■■□□ 2.53
SLC9A3R1-203ENST00000578958 CLASP1Q7Z460 1538 aa30.8■■■□□ 2.52
SLC9A3R1-203ENST00000578958 ARAP1Q96P48 1450 aa30.8■■■□□ 2.52
SLC9A3R1-203ENST00000578958 GRIN2AQ12879 1464 aa30.64■■■□□ 2.5
SLC9A3R1-203ENST00000578958 TRHP20396 242 aaPredicted RBP30.64■■■□□ 2.5
SLC9A3R1-203ENST00000578958 FHAD1B1AJZ9 1412 aa30.62■■■□□ 2.49
SLC9A3R1-203ENST00000578958 ADAMTS12P58397 1594 aa30.62■■■□□ 2.49
SLC9A3R1-203ENST00000578958 ERICH3Q5RHP9 1530 aa30.58■■■□□ 2.49
SLC9A3R1-203ENST00000578958 NUP160Q12769 1436 aa30.5■■■□□ 2.47
SLC9A3R1-203ENST00000578958 CEP170Q5SW79 1584 aa30.48■■■□□ 2.47
SLC9A3R1-203ENST00000578958 KIF27Q86VH2 1401 aa30.36■■■□□ 2.45
SLC9A3R1-203ENST00000578958 ERCC6L2Q5T890 1561 aa30.34■■■□□ 2.45
SLC9A3R1-203ENST00000578958 JPH4Q96JJ6 628 aa30.3■■■□□ 2.44
SLC9A3R1-203ENST00000578958 SHROOM2Q13796 1616 aa30.29■■■□□ 2.44
SLC9A3R1-203ENST00000578958 PRG4Q92954 1404 aaPredicted RBP30.27■■■□□ 2.44
SLC9A3R1-203ENST00000578958 IGF1RP08069 1367 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms