Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CBX1P83916 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CBX1P83916 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.12■□□□□ 0.33
CBX1P83916 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX1P83916 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX1P83916 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CBX1P83916 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX1P83916 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX1P83916 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CBX1P83916 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CBX1P83916 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CBX1P83916 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CBX1P83916 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CBX1P83916 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.12■□□□□ 0.33
CBX1P83916 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX1P83916 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX1P83916 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX1P83916 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.12■□□□□ 0.33
CBX1P83916 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX1P83916 AC083906.2-201ENST00000511578 360 ntBASIC17.12■□□□□ 0.33
CBX1P83916 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.12■□□□□ 0.33
CBX1P83916 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX1P83916 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.12■□□□□ 0.33
CBX1P83916 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CBX1P83916 PPT1-213ENST00000641319 2388 ntBASIC17.12■□□□□ 0.33
CBX1P83916 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX1P83916 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX1P83916 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX1P83916 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX1P83916 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX1P83916 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX1P83916 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX1P83916 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX1P83916 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CBX1P83916 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.12■□□□□ 0.33
CBX1P83916 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX1P83916 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX1P83916 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX1P83916 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CBX1P83916 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
CBX1P83916 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CBX1P83916 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CBX1P83916 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX1P83916 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CBX1P83916 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX1P83916 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX1P83916 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX1P83916 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX1P83916 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX1P83916 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX1P83916 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX1P83916 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CBX1P83916 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.11■□□□□ 0.33
CBX1P83916 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX1P83916 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX1P83916 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CBX1P83916 AC104390.1-201ENST00000555663 520 ntBASIC17.11■□□□□ 0.33
CBX1P83916 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX1P83916 MIR4758-201ENST00000577688 71 ntBASIC17.11■□□□□ 0.33
CBX1P83916 MIR3180-4-201ENST00000582223 153 ntBASIC17.11■□□□□ 0.33
CBX1P83916 AC011298.2-201ENST00000617989 482 ntBASIC17.11■□□□□ 0.33
CBX1P83916 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CBX1P83916 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX1P83916 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX1P83916 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX1P83916 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX1P83916 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.11■□□□□ 0.33
CBX1P83916 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX1P83916 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.11■□□□□ 0.33
CBX1P83916 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX1P83916 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX1P83916 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CBX1P83916 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX1P83916 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX1P83916 MROH4P-201ENST00000431302 1578 ntBASIC17.11■□□□□ 0.33
CBX1P83916 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CBX1P83916 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CBX1P83916 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.1■□□□□ 0.33
CBX1P83916 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC17.1■□□□□ 0.33
CBX1P83916 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC17.1■□□□□ 0.33
CBX1P83916 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CBX1P83916 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CBX1P83916 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms