Protein–RNA interactions for Protein: P48556

PSMD8, 26S proteasome non-ATPase regulatory subunit 8, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD8P48556 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PSMD8P48556 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD8P48556 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD8P48556 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.62■□□□□ 0.25
PSMD8P48556 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.62■□□□□ 0.25
PSMD8P48556 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.62■□□□□ 0.25
PSMD8P48556 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD8P48556 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD8P48556 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PSMD8P48556 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD8P48556 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD8P48556 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.62■□□□□ 0.25
PSMD8P48556 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD8P48556 FOXO1B-201ENST00000504678 1527 ntBASIC16.62■□□□□ 0.25
PSMD8P48556 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
PSMD8P48556 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
PSMD8P48556 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PSMD8P48556 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.62■□□□□ 0.25
PSMD8P48556 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.62■□□□□ 0.25
PSMD8P48556 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.62■□□□□ 0.25
PSMD8P48556 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.62■□□□□ 0.25
PSMD8P48556 AC018529.1-201ENST00000613063 361 ntBASIC16.62■□□□□ 0.25
PSMD8P48556 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.62■□□□□ 0.25
PSMD8P48556 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.62■□□□□ 0.25
PSMD8P48556 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.62■□□□□ 0.25
PSMD8P48556 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD8P48556 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD8P48556 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.62■□□□□ 0.25
PSMD8P48556 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.62■□□□□ 0.25
PSMD8P48556 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
PSMD8P48556 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.62■□□□□ 0.25
PSMD8P48556 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD8P48556 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.62■□□□□ 0.25
PSMD8P48556 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD8P48556 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.62■□□□□ 0.25
PSMD8P48556 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.62■□□□□ 0.25
PSMD8P48556 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD8P48556 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD8P48556 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.62■□□□□ 0.25
PSMD8P48556 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD8P48556 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD8P48556 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD8P48556 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD8P48556 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD8P48556 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PSMD8P48556 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.61■□□□□ 0.25
PSMD8P48556 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.61■□□□□ 0.25
PSMD8P48556 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD8P48556 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD8P48556 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD8P48556 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD8P48556 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD8P48556 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.61■□□□□ 0.25
PSMD8P48556 HLA-H-201ENST00000383620 1096 ntBASIC16.61■□□□□ 0.25
PSMD8P48556 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.61■□□□□ 0.25
PSMD8P48556 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.61■□□□□ 0.25
PSMD8P48556 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.61■□□□□ 0.25
PSMD8P48556 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD8P48556 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.61■□□□□ 0.25
PSMD8P48556 MIR4745-201ENST00000577608 62 ntBASIC16.61■□□□□ 0.25
PSMD8P48556 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PSMD8P48556 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.61■□□□□ 0.25
PSMD8P48556 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD8P48556 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.61■□□□□ 0.25
PSMD8P48556 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD8P48556 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PSMD8P48556 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.61■□□□□ 0.25
PSMD8P48556 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.6■□□□□ 0.25
PSMD8P48556 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD8P48556 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PSMD8P48556 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD8P48556 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.6■□□□□ 0.25
PSMD8P48556 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.6■□□□□ 0.25
PSMD8P48556 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD8P48556 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
PSMD8P48556 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD8P48556 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.6■□□□□ 0.25
PSMD8P48556 AC092171.3-201ENST00000610122 2651 ntBASIC16.6■□□□□ 0.25
PSMD8P48556 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD8P48556 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.6■□□□□ 0.25
PSMD8P48556 AL512652.2-201ENST00000625156 1716 ntBASIC16.6■□□□□ 0.25
PSMD8P48556 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD8P48556 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.6■□□□□ 0.25
PSMD8P48556 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD8P48556 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.6■□□□□ 0.25
PSMD8P48556 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
PSMD8P48556 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PSMD8P48556 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.6■□□□□ 0.25
PSMD8P48556 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PSMD8P48556 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD8P48556 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD8P48556 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.6■□□□□ 0.25
PSMD8P48556 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.6■□□□□ 0.25
PSMD8P48556 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD8P48556 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.6■□□□□ 0.25
PSMD8P48556 AL158211.3-201ENST00000607385 239 ntBASIC16.6■□□□□ 0.25
PSMD8P48556 SPTSSB-204ENST00000617024 1292 ntBASIC16.6■□□□□ 0.25
PSMD8P48556 AJ011932.1-201ENST00000621707 465 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms