Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC3P02656 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
APOC3P02656 INTS4P1-203ENST00000641008 3683 ntBASIC13.15□□□□□ -0.3
APOC3P02656 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC3P02656 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
APOC3P02656 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC3P02656 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC3P02656 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.15□□□□□ -0.31
APOC3P02656 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.15□□□□□ -0.31
APOC3P02656 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.14□□□□□ -0.31
APOC3P02656 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.14□□□□□ -0.31
APOC3P02656 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.14□□□□□ -0.31
APOC3P02656 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.14□□□□□ -0.31
APOC3P02656 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
APOC3P02656 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.14□□□□□ -0.31
APOC3P02656 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
APOC3P02656 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.14□□□□□ -0.31
APOC3P02656 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.14□□□□□ -0.31
APOC3P02656 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.14□□□□□ -0.31
APOC3P02656 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.14□□□□□ -0.31
APOC3P02656 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.14□□□□□ -0.31
APOC3P02656 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
APOC3P02656 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.14□□□□□ -0.31
APOC3P02656 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
APOC3P02656 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.14□□□□□ -0.31
APOC3P02656 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.14□□□□□ -0.31
APOC3P02656 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.14□□□□□ -0.31
APOC3P02656 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
APOC3P02656 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.14□□□□□ -0.31
APOC3P02656 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
APOC3P02656 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC3P02656 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC3P02656 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
APOC3P02656 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC3P02656 AL023775.1-201ENST00000454907 1746 ntBASIC13.13□□□□□ -0.31
APOC3P02656 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.13□□□□□ -0.31
APOC3P02656 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOC3P02656 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOC3P02656 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.13□□□□□ -0.31
APOC3P02656 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
APOC3P02656 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC3P02656 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.13□□□□□ -0.31
APOC3P02656 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
APOC3P02656 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
APOC3P02656 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
APOC3P02656 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC3P02656 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
APOC3P02656 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOC3P02656 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
APOC3P02656 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC3P02656 PPT1-213ENST00000641319 2388 ntBASIC13.13□□□□□ -0.31
APOC3P02656 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOC3P02656 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC3P02656 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOC3P02656 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOC3P02656 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC3P02656 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC3P02656 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
APOC3P02656 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms