Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.15■□□□□ 0.82
SMARCA5O60264 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.15■□□□□ 0.82
SMARCA5O60264 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC20.15■□□□□ 0.82
SMARCA5O60264 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCA5O60264 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.15■□□□□ 0.82
SMARCA5O60264 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SMARCA5O60264 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
SMARCA5O60264 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCA5O60264 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
SMARCA5O60264 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.15■□□□□ 0.82
SMARCA5O60264 AC142381.1-201ENST00000426099 345 ntBASIC20.15■□□□□ 0.82
SMARCA5O60264 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.15■□□□□ 0.82
SMARCA5O60264 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCA5O60264 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.15■□□□□ 0.82
SMARCA5O60264 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.15■□□□□ 0.82
SMARCA5O60264 FAM86C2P-203ENST00000528684 1004 ntBASIC20.15■□□□□ 0.82
SMARCA5O60264 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.15■□□□□ 0.82
SMARCA5O60264 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.15■□□□□ 0.82
SMARCA5O60264 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.15■□□□□ 0.82
SMARCA5O60264 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SMARCA5O60264 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SMARCA5O60264 AC008267.7-201ENST00000624570 1194 ntBASIC20.15■□□□□ 0.82
SMARCA5O60264 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SMARCA5O60264 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCA5O60264 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SMARCA5O60264 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCA5O60264 AC007950.2-201ENST00000615045 2347 ntBASIC20.15■□□□□ 0.82
SMARCA5O60264 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCA5O60264 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC20.15■□□□□ 0.82
SMARCA5O60264 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCA5O60264 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SMARCA5O60264 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCA5O60264 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCA5O60264 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCA5O60264 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SMARCA5O60264 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC20.14■□□□□ 0.82
SMARCA5O60264 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SMARCA5O60264 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC20.14■□□□□ 0.82
SMARCA5O60264 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.14■□□□□ 0.82
SMARCA5O60264 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCA5O60264 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
SMARCA5O60264 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
SMARCA5O60264 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SMARCA5O60264 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCA5O60264 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCA5O60264 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SMARCA5O60264 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.14■□□□□ 0.81
SMARCA5O60264 CROCCP1-201ENST00000426910 5675 ntBASIC20.14■□□□□ 0.81
SMARCA5O60264 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCA5O60264 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.14■□□□□ 0.81
SMARCA5O60264 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.14■□□□□ 0.81
SMARCA5O60264 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.14■□□□□ 0.81
SMARCA5O60264 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SMARCA5O60264 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCA5O60264 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCA5O60264 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCA5O60264 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
SMARCA5O60264 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCA5O60264 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCA5O60264 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.14■□□□□ 0.81
SMARCA5O60264 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.14■□□□□ 0.81
SMARCA5O60264 FAM58DP-201ENST00000428076 619 ntBASIC20.14■□□□□ 0.81
SMARCA5O60264 AL592309.1-201ENST00000443127 649 ntBASIC20.14■□□□□ 0.81
SMARCA5O60264 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.14■□□□□ 0.81
SMARCA5O60264 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.14■□□□□ 0.81
SMARCA5O60264 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.14■□□□□ 0.81
SMARCA5O60264 AC093520.2-201ENST00000561830 333 ntBASIC20.14■□□□□ 0.81
SMARCA5O60264 AP000842.3-202ENST00000569238 1080 ntBASIC20.14■□□□□ 0.81
SMARCA5O60264 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.14■□□□□ 0.81
SMARCA5O60264 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.14■□□□□ 0.81
SMARCA5O60264 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCA5O60264 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCA5O60264 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC20.14■□□□□ 0.81
SMARCA5O60264 AP003680.1-201ENST00000598970 3660 ntBASIC20.14■□□□□ 0.81
SMARCA5O60264 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC20.14■□□□□ 0.81
SMARCA5O60264 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCA5O60264 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SMARCA5O60264 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.13■□□□□ 0.81
SMARCA5O60264 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCA5O60264 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
SMARCA5O60264 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SMARCA5O60264 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCA5O60264 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCA5O60264 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCA5O60264 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC20.13■□□□□ 0.81
SMARCA5O60264 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCA5O60264 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCA5O60264 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.13■□□□□ 0.81
SMARCA5O60264 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SMARCA5O60264 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.13■□□□□ 0.81
SMARCA5O60264 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SMARCA5O60264 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC20.13■□□□□ 0.81
SMARCA5O60264 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCA5O60264 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.13■□□□□ 0.81
SMARCA5O60264 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.13■□□□□ 0.81
SMARCA5O60264 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
SMARCA5O60264 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.13■□□□□ 0.81
SMARCA5O60264 AC004461.1-201ENST00000412461 403 ntBASIC20.13■□□□□ 0.81
SMARCA5O60264 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
SMARCA5O60264 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms