Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RIPK2O43353 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.64■□□□□ 0.25
RIPK2O43353 PCED1CP-201ENST00000419887 785 ntBASIC16.64■□□□□ 0.25
RIPK2O43353 TMPOP1-202ENST00000424642 1267 ntBASIC16.64■□□□□ 0.25
RIPK2O43353 KRT16P4-201ENST00000453883 522 ntBASIC16.64■□□□□ 0.25
RIPK2O43353 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.64■□□□□ 0.25
RIPK2O43353 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.64■□□□□ 0.25
RIPK2O43353 AL805961.1-202ENST00000641562 540 ntBASIC16.64■□□□□ 0.25
RIPK2O43353 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
RIPK2O43353 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
RIPK2O43353 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.64■□□□□ 0.25
RIPK2O43353 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.64■□□□□ 0.25
RIPK2O43353 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.64■□□□□ 0.25
RIPK2O43353 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.63■□□□□ 0.25
RIPK2O43353 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
RIPK2O43353 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.63■□□□□ 0.25
RIPK2O43353 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RIPK2O43353 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 RBM17P3-201ENST00000417687 1192 ntBASIC16.63■□□□□ 0.25
RIPK2O43353 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.63■□□□□ 0.25
RIPK2O43353 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RIPK2O43353 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.63■□□□□ 0.25
RIPK2O43353 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.63■□□□□ 0.25
RIPK2O43353 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.63■□□□□ 0.25
RIPK2O43353 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RIPK2O43353 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RIPK2O43353 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
RIPK2O43353 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.63■□□□□ 0.25
RIPK2O43353 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.63■□□□□ 0.25
RIPK2O43353 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.63■□□□□ 0.25
RIPK2O43353 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RIPK2O43353 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.63■□□□□ 0.25
RIPK2O43353 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.63■□□□□ 0.25
RIPK2O43353 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.62■□□□□ 0.25
RIPK2O43353 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.62■□□□□ 0.25
RIPK2O43353 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.62■□□□□ 0.25
RIPK2O43353 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.62■□□□□ 0.25
RIPK2O43353 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.62■□□□□ 0.25
RIPK2O43353 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RIPK2O43353 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RIPK2O43353 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms