Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 AC120114.3-201ENST00000611923 658 ntBASIC15.14■□□□□ 0.01
CNOT9Q92600 BX640515.1-201ENST00000617215 977 ntBASIC15.14■□□□□ 0.01
CNOT9Q92600 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.14■□□□□ 0.01
CNOT9Q92600 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.14■□□□□ 0.01
CNOT9Q92600 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.14■□□□□ 0.01
CNOT9Q92600 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CNOT9Q92600 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
CNOT9Q92600 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CNOT9Q92600 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.14■□□□□ 0.01
CNOT9Q92600 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.14■□□□□ 0.01
CNOT9Q92600 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CNOT9Q92600 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.13■□□□□ 0.01
CNOT9Q92600 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT9Q92600 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.13■□□□□ 0.01
CNOT9Q92600 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT9Q92600 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.13■□□□□ 0.01
CNOT9Q92600 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT9Q92600 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT9Q92600 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT9Q92600 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT9Q92600 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT9Q92600 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT9Q92600 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.13■□□□□ 0.01
CNOT9Q92600 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.13■□□□□ 0.01
CNOT9Q92600 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CNOT9Q92600 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT9Q92600 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CNOT9Q92600 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CNOT9Q92600 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.13■□□□□ 0.01
CNOT9Q92600 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CNOT9Q92600 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.13■□□□□ 0.01
CNOT9Q92600 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.13■□□□□ 0.01
CNOT9Q92600 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.13■□□□□ 0.01
CNOT9Q92600 AC026396.1-201ENST00000419388 421 ntBASIC15.13■□□□□ 0.01
CNOT9Q92600 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.13■□□□□ 0.01
CNOT9Q92600 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CNOT9Q92600 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CNOT9Q92600 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CNOT9Q92600 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT9Q92600 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT9Q92600 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT9Q92600 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
CNOT9Q92600 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT9Q92600 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
CNOT9Q92600 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.13■□□□□ 0.01
CNOT9Q92600 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT9Q92600 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT9Q92600 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.13■□□□□ 0.01
CNOT9Q92600 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.13■□□□□ 0.01
CNOT9Q92600 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT9Q92600 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CNOT9Q92600 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CNOT9Q92600 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.12■□□□□ 0.01
CNOT9Q92600 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CNOT9Q92600 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.12■□□□□ 0.01
CNOT9Q92600 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.12■□□□□ 0.01
CNOT9Q92600 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.12■□□□□ 0.01
CNOT9Q92600 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.12■□□□□ 0.01
CNOT9Q92600 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CNOT9Q92600 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.12■□□□□ 0.01
CNOT9Q92600 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.12■□□□□ 0.01
CNOT9Q92600 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.12■□□□□ 0.01
CNOT9Q92600 AC109635.5-201ENST00000533593 962 ntBASIC15.12■□□□□ 0.01
CNOT9Q92600 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.12■□□□□ 0.01
CNOT9Q92600 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.12■□□□□ 0.01
CNOT9Q92600 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.12■□□□□ 0.01
CNOT9Q92600 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CNOT9Q92600 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.12■□□□□ 0.01
CNOT9Q92600 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CNOT9Q92600 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms