Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 CPNE4-209ENST00000512055 5431 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 GUSBP5-201ENST00000418136 578 ntBASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 RPS2P52-201ENST00000469610 820 ntBASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 AC005829.2-201ENST00000571422 1056 ntBASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 MAG-206ENST00000597035 542 ntTSL 4 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 RCC2P3-201ENST00000418112 1537 ntBASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
SPTSSBQ8NFR3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 AC131902.2-201ENST00000566892 2172 ntBASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 KCNMB1-201ENST00000274629 5052 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 BX324167.2-201ENST00000623717 3316 ntBASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms