RNA–Protein interactions for RNA: ENST00000232607.6

UMPS-201, Transcript of uridine monophosphate synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UMPS, Length 6,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UMPS-201ENST00000232607 DCAF8L2P0C7V8 631 aa22.02■■□□□ 1.12
UMPS-201ENST00000232607 SUPT5HO00267 1087 aaKnown RBP20.69■□□□□ 0.9
UMPS-201ENST00000232607 EHMT2Q96KQ7 1210 aa20.62■□□□□ 0.89
UMPS-201ENST00000232607 SHROOM4Q9ULL8 1493 aa20.47■□□□□ 0.87
UMPS-201ENST00000232607 NISCHQ9Y2I1 1504 aa19.98■□□□□ 0.79
UMPS-201ENST00000232607 TTBK1Q5TCY1 1321 aaPredicted RBP19.83■□□□□ 0.76
UMPS-201ENST00000232607 FAM9AQ8IZU1 332 aaPredicted RBP19.69■□□□□ 0.74
UMPS-201ENST00000232607 RANGAP1P46060 587 aaPredicted RBP19.58■□□□□ 0.72
UMPS-201ENST00000232607 APLP2Q06481 763 aa19.44■□□□□ 0.7
UMPS-201ENST00000232607 ATP1B4Q9UN42 357 aaPredicted RBP19.25■□□□□ 0.67
UMPS-201ENST00000232607 PCGF6Q9BYE7 350 aa19.24■□□□□ 0.67
UMPS-201ENST00000232607 PELP1Q8IZL8 1130 aaKnown RBP19.07■□□□□ 0.64
UMPS-201ENST00000232607 PPARGC1BQ86YN6 1023 aaKnown RBP18.97■□□□□ 0.63
UMPS-201ENST00000232607 TRIM41Q8WV44 630 aa18.91■□□□□ 0.62
UMPS-201ENST00000232607 CCER1Q8TC90 406 aaPredicted RBP18.87■□□□□ 0.61
UMPS-201ENST00000232607 UBTFP17480 764 aaKnown RBP18.85■□□□□ 0.61
UMPS-201ENST00000232607 YTHDC1Q96MU7 727 aaKnown RBP18.76■□□□□ 0.59
UMPS-201ENST00000232607 ERICH6Q7L0X2 663 aa18.67■□□□□ 0.58
UMPS-201ENST00000232607 ITGAEP38570 1179 aa18.54■□□□□ 0.56
UMPS-201ENST00000232607 CENPBP07199 599 aaPredicted RBP18.51■□□□□ 0.55
UMPS-201ENST00000232607 CNGB1Q14028 1251 aaPredicted RBP18.51■□□□□ 0.55
UMPS-201ENST00000232607 MYT1LQ9UL68 1186 aa18.49■□□□□ 0.55
UMPS-201ENST00000232607 CHIC1Q5VXU3 224 aa18.49■□□□□ 0.55
UMPS-201ENST00000232607 POLR3GLQ9BT43 218 aa18.47■□□□□ 0.55
UMPS-201ENST00000232607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.43■□□□□ 0.54
UMPS-201ENST00000232607 HNRNPUL2Q1KMD3 747 aaKnown RBP18.43■□□□□ 0.54
UMPS-201ENST00000232607 ZEB1P37275 1124 aaPredicted RBP18.35■□□□□ 0.53
UMPS-201ENST00000232607 LOC105371045A0A1W2PR82 267 aa18.32■□□□□ 0.52
UMPS-201ENST00000232607 NEFLP07196 543 aa18.29■□□□□ 0.52
UMPS-201ENST00000232607 SLC4A1APQ9BWU0 796 aaKnown RBP18.13■□□□□ 0.49
UMPS-201ENST00000232607 TRIM26Q12899 539 aaPredicted RBP18.07■□□□□ 0.48
UMPS-201ENST00000232607 MYT1Q01538 1121 aa18.06■□□□□ 0.48
UMPS-201ENST00000232607 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
UMPS-201ENST00000232607 HRCP23327 699 aa17.94■□□□□ 0.46
UMPS-201ENST00000232607 FAM50AQ14320 339 aaKnown RBP17.88■□□□□ 0.45
UMPS-201ENST00000232607 DAXXQ9UER7 740 aaPredicted RBP17.86■□□□□ 0.45
UMPS-201ENST00000232607 ABCC9O60706 1549 aa17.82■□□□□ 0.44
UMPS-201ENST00000232607 NEUROD1Q13562 356 aa17.8■□□□□ 0.44
UMPS-201ENST00000232607 TRIM52Q96A61 297 aa17.77■□□□□ 0.43
UMPS-201ENST00000232607 FBLN2P98095 1184 aa17.75■□□□□ 0.43
UMPS-201ENST00000232607 ARID3CA6NKF2 412 aa17.74■□□□□ 0.43
UMPS-201ENST00000232607 ZNF326Q5BKZ1 582 aaKnown RBP17.71■□□□□ 0.43
UMPS-201ENST00000232607 BCL11AQ9H165 835 aa17.7■□□□□ 0.42
UMPS-201ENST00000232607 CLSPNQ9HAW4 1339 aa17.64■□□□□ 0.41
UMPS-201ENST00000232607 BCANQ96GW7 911 aa17.64■□□□□ 0.41
UMPS-201ENST00000232607 DIEXFQ68CQ4 756 aaKnown RBP17.61■□□□□ 0.41
UMPS-201ENST00000232607 P3H3Q8IVL6 736 aa17.6■□□□□ 0.41
UMPS-201ENST00000232607 SLC24A1O60721 1099 aa17.58■□□□□ 0.4
UMPS-201ENST00000232607 PLPPR3Q6T4P5 718 aa17.51■□□□□ 0.39
UMPS-201ENST00000232607 ZNF316A6NFI3 1004 aaPredicted RBP17.49■□□□□ 0.39
UMPS-201ENST00000232607 ZNF777Q9ULD5 760 aaPredicted RBP17.38■□□□□ 0.37
UMPS-201ENST00000232607 RTL5Q5HYW3 569 aaPredicted RBP17.3■□□□□ 0.36
UMPS-201ENST00000232607 ANP32CO43423 234 aa17.28■□□□□ 0.36
UMPS-201ENST00000232607 GTF3C3Q9Y5Q9 886 aa17.28■□□□□ 0.36
UMPS-201ENST00000232607 CANXP27824 592 aaKnown RBP17.24■□□□□ 0.35
UMPS-201ENST00000232607 SENP3Q9H4L4 574 aaPredicted RBP17.23■□□□□ 0.35
UMPS-201ENST00000232607 CHGAP10645 457 aaKnown RBP17.18■□□□□ 0.34
UMPS-201ENST00000232607 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
UMPS-201ENST00000232607 SALL2Q9Y467 1007 aaPredicted RBP17.12■□□□□ 0.33
UMPS-201ENST00000232607 SCRIBQ14160 1630 aa17.11■□□□□ 0.33
UMPS-201ENST00000232607 NPM2Q86SE8 214 aaKnown RBP17.1■□□□□ 0.33
UMPS-201ENST00000232607 CDK11AQ9UQ88 783 aaPredicted RBP17.08■□□□□ 0.33
UMPS-201ENST00000232607 PLEKHG5O94827 1062 aa17.07■□□□□ 0.32
UMPS-201ENST00000232607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.04■□□□□ 0.32
UMPS-201ENST00000232607 STAG3Q9UJ98 1225 aa17.04■□□□□ 0.32
UMPS-201ENST00000232607 CHIC2Q9UKJ5 165 aa17.03■□□□□ 0.32
UMPS-201ENST00000232607 NEFMP07197 916 aa17.02■□□□□ 0.32
UMPS-201ENST00000232607 CSRNP3Q8WYN3 585 aa17.02■□□□□ 0.31
UMPS-201ENST00000232607 ESF1Q9H501 851 aaKnown RBP17.01■□□□□ 0.31
UMPS-201ENST00000232607 FAM9BQ8IZU0 186 aa16.95■□□□□ 0.3
UMPS-201ENST00000232607 HIRIP3Q9BW71 556 aaPredicted RBP16.94■□□□□ 0.3
UMPS-201ENST00000232607 SCAF1Q9H7N4 1312 aaKnown RBP16.93■□□□□ 0.3
UMPS-201ENST00000232607 KDM2AQ9Y2K7 1162 aa16.91■□□□□ 0.3
UMPS-201ENST00000232607 DDX10Q13206 875 aaKnown RBP16.91■□□□□ 0.3
UMPS-201ENST00000232607 SENP3-EIF4A1A0A087X0R7 540 aa16.91■□□□□ 0.3
UMPS-201ENST00000232607 A0A0G2JS52 829 aa16.88■□□□□ 0.29
UMPS-201ENST00000232607 FKBP8Q14318 412 aa16.88■□□□□ 0.29
UMPS-201ENST00000232607 ZBTB7CA1YPR0 619 aa16.85■□□□□ 0.29
UMPS-201ENST00000232607 HNRNPUQ00839 825 aaKnown RBP eCLIP16.84■□□□□ 0.29
UMPS-201ENST00000232607 TONSLQ96HA7 1378 aa16.83■□□□□ 0.29
UMPS-201ENST00000232607 NPM1P06748 294 aaKnown RBP eCLIP16.81■□□□□ 0.28
UMPS-201ENST00000232607 IRX6P78412 446 aaPredicted RBP16.8■□□□□ 0.28
UMPS-201ENST00000232607 ACIN1Q9UKV3 1341 aaKnown RBP16.8■□□□□ 0.28
UMPS-201ENST00000232607 ARXQ96QS3 562 aa16.79■□□□□ 0.28
UMPS-201ENST00000232607 ANP32AP39687 249 aaKnown RBP16.78■□□□□ 0.28
UMPS-201ENST00000232607 KCNH8Q96L42 1107 aa16.74■□□□□ 0.27
UMPS-201ENST00000232607 HSP90AA1P07900 732 aaKnown RBP16.73■□□□□ 0.27
UMPS-201ENST00000232607 C14orf37Q86TY3 774 aa16.7■□□□□ 0.26
UMPS-201ENST00000232607 RRP7BPQ9NSQ0 103 aa16.7■□□□□ 0.26
UMPS-201ENST00000232607 TMC1Q8TDI8 760 aa16.68■□□□□ 0.26
UMPS-201ENST00000232607 CHMP7Q8WUX9 453 aaPredicted RBP16.68■□□□□ 0.26
UMPS-201ENST00000232607 NBR1Q14596 966 aa16.67■□□□□ 0.26
UMPS-201ENST00000232607 RGL3Q3MIN7 710 aa16.62■□□□□ 0.25
UMPS-201ENST00000232607 WDR43Q15061 677 aaKnown RBP eCLIP16.61■□□□□ 0.25
UMPS-201ENST00000232607 MRS2Q9HD23 443 aa16.59■□□□□ 0.25
UMPS-201ENST00000232607 MTUS2Q5JR59 1369 aa16.59■□□□□ 0.25
UMPS-201ENST00000232607 TSPY4P0CV99 314 aa16.58■□□□□ 0.25
UMPS-201ENST00000232607 TSPY10P0CW01 314 aa16.58■□□□□ 0.25
UMPS-201ENST00000232607 EIF5BO60841 1220 aaKnown RBP16.58■□□□□ 0.24
UMPS-201ENST00000232607 CCDC136Q96JN2 1154 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms