Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
DCAF4L1Q3SXM0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DCAF4L1Q3SXM0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 AC020916.1-201ENST00000587762 1774 ntBASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 SPDYE17-201ENST00000412399 783 ntBASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 AC087499.5-201ENST00000452760 1342 ntBASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 REXO1L8P-201ENST00000604378 1897 ntBASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.63■□□□□ 0.41
DCAF4L1Q3SXM0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DCAF4L1Q3SXM0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 TSPY16P-201ENST00000449843 468 ntBASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 SERBP1P3-201ENST00000459980 809 ntBASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 KRT8P12-202ENST00000472924 1397 ntBASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DCAF4L1Q3SXM0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms