Protein–RNA interactions for Protein: O96011

PEX11B, Peroxisomal membrane protein 11B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11BO96011 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX11BO96011 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX11BO96011 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PEX11BO96011 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX11BO96011 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX11BO96011 AL365203.3-201ENST00000609742 2057 ntBASIC16.46■□□□□ 0.23
PEX11BO96011 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX11BO96011 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.46■□□□□ 0.23
PEX11BO96011 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX11BO96011 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX11BO96011 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PEX11BO96011 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PEX11BO96011 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.46■□□□□ 0.23
PEX11BO96011 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.46■□□□□ 0.23
PEX11BO96011 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.46■□□□□ 0.23
PEX11BO96011 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.46■□□□□ 0.23
PEX11BO96011 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.46■□□□□ 0.23
PEX11BO96011 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PEX11BO96011 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.46■□□□□ 0.23
PEX11BO96011 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.46■□□□□ 0.23
PEX11BO96011 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX11BO96011 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PEX11BO96011 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX11BO96011 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX11BO96011 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
PEX11BO96011 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PEX11BO96011 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PEX11BO96011 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PEX11BO96011 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PEX11BO96011 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.45■□□□□ 0.22
PEX11BO96011 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.45■□□□□ 0.22
PEX11BO96011 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.45■□□□□ 0.22
PEX11BO96011 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.45■□□□□ 0.22
PEX11BO96011 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PEX11BO96011 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.45■□□□□ 0.22
PEX11BO96011 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.45■□□□□ 0.22
PEX11BO96011 AC069262.1-201ENST00000539058 672 ntBASIC16.45■□□□□ 0.22
PEX11BO96011 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.45■□□□□ 0.22
PEX11BO96011 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.45■□□□□ 0.22
PEX11BO96011 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.45■□□□□ 0.22
PEX11BO96011 AC007967.4-201ENST00000614700 386 ntBASIC16.45■□□□□ 0.22
PEX11BO96011 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.45■□□□□ 0.22
PEX11BO96011 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.45■□□□□ 0.22
PEX11BO96011 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
PEX11BO96011 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PEX11BO96011 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX11BO96011 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PEX11BO96011 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.45■□□□□ 0.22
PEX11BO96011 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PEX11BO96011 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.44■□□□□ 0.22
PEX11BO96011 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX11BO96011 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.44■□□□□ 0.22
PEX11BO96011 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PEX11BO96011 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX11BO96011 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.44■□□□□ 0.22
PEX11BO96011 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX11BO96011 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX11BO96011 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX11BO96011 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.44■□□□□ 0.22
PEX11BO96011 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.44■□□□□ 0.22
PEX11BO96011 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.44■□□□□ 0.22
PEX11BO96011 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.44■□□□□ 0.22
PEX11BO96011 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.44■□□□□ 0.22
PEX11BO96011 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.44■□□□□ 0.22
PEX11BO96011 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.44■□□□□ 0.22
PEX11BO96011 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.44■□□□□ 0.22
PEX11BO96011 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.44■□□□□ 0.22
PEX11BO96011 MIR4453-201ENST00000584019 89 ntBASIC16.44■□□□□ 0.22
PEX11BO96011 AL133215.2-201ENST00000609242 977 ntBASIC16.44■□□□□ 0.22
PEX11BO96011 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PEX11BO96011 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PEX11BO96011 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX11BO96011 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PEX11BO96011 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PEX11BO96011 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
PEX11BO96011 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PEX11BO96011 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX11BO96011 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX11BO96011 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
PEX11BO96011 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms