Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 AC010327.4-202ENST00000591484 748 ntBASIC14.65□□□□□ -0.06
NELFAQ9H3P2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 MTDHP5-201ENST00000598980 586 ntBASIC14.65□□□□□ -0.06
NELFAQ9H3P2 AL078644.1-201ENST00000609881 752 ntBASIC14.65□□□□□ -0.06
NELFAQ9H3P2 AC020765.3-201ENST00000613051 740 ntBASIC14.65□□□□□ -0.06
NELFAQ9H3P2 AC091812.2-201ENST00000619081 385 ntBASIC14.65□□□□□ -0.06
NELFAQ9H3P2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 LINC01144-201ENST00000626198 1710 ntBASIC14.64□□□□□ -0.07
NELFAQ9H3P2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 RPSAP43-201ENST00000402237 625 ntBASIC14.64□□□□□ -0.07
NELFAQ9H3P2 PMS2P4-201ENST00000412466 1052 ntBASIC14.64□□□□□ -0.07
NELFAQ9H3P2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 AC109635.5-201ENST00000533593 962 ntBASIC14.64□□□□□ -0.07
NELFAQ9H3P2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 AC092865.5-201ENST00000545435 363 ntBASIC14.64□□□□□ -0.07
NELFAQ9H3P2 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 AL009183.1-201ENST00000603760 355 ntBASIC14.64□□□□□ -0.07
NELFAQ9H3P2 AC099522.2-201ENST00000607001 744 ntBASIC14.64□□□□□ -0.07
NELFAQ9H3P2 AC021097.1-201ENST00000607902 574 ntBASIC14.64□□□□□ -0.07
NELFAQ9H3P2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 AC068418.2-201ENST00000577309 3703 ntBASIC14.64□□□□□ -0.07
NELFAQ9H3P2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 CYP2T1P-202ENST00000641596 2535 ntBASIC14.64□□□□□ -0.07
NELFAQ9H3P2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 AL662844.4-201ENST00000606367 2838 ntBASIC14.64□□□□□ -0.07
NELFAQ9H3P2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NELFAQ9H3P2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NELFAQ9H3P2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NELFAQ9H3P2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.63□□□□□ -0.07
NELFAQ9H3P2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NELFAQ9H3P2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
NELFAQ9H3P2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NELFAQ9H3P2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NELFAQ9H3P2 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NELFAQ9H3P2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.63□□□□□ -0.07
NELFAQ9H3P2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.63□□□□□ -0.07
NELFAQ9H3P2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NELFAQ9H3P2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NELFAQ9H3P2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NELFAQ9H3P2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.63□□□□□ -0.07
NELFAQ9H3P2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms