Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
BBS1Q8NFJ9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BBS1Q8NFJ9 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BBS1Q8NFJ9 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS1Q8NFJ9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 AC091076.1-201ENST00000610741 619 ntBASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 PPT1-215ENST00000641471 2368 ntBASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS1Q8NFJ9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BBS1Q8NFJ9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.77□□□□□ -0.04
BBS1Q8NFJ9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BBS1Q8NFJ9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.77□□□□□ -0.04
BBS1Q8NFJ9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BBS1Q8NFJ9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BBS1Q8NFJ9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
BBS1Q8NFJ9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BBS1Q8NFJ9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
BBS1Q8NFJ9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms