Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLX4Q8IY92 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.58■□□□□ 0.73
SLX4Q8IY92 CALR4P-201ENST00000431943 946 ntBASIC19.58■□□□□ 0.73
SLX4Q8IY92 RPL13AP25-201ENST00000484130 612 ntBASIC19.58■□□□□ 0.73
SLX4Q8IY92 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SLX4Q8IY92 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SLX4Q8IY92 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SLX4Q8IY92 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLX4Q8IY92 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.58■□□□□ 0.72
SLX4Q8IY92 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.58■□□□□ 0.72
SLX4Q8IY92 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SLX4Q8IY92 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.58■□□□□ 0.72
SLX4Q8IY92 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
SLX4Q8IY92 REXO1L8P-201ENST00000604378 1897 ntBASIC19.58■□□□□ 0.72
SLX4Q8IY92 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLX4Q8IY92 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLX4Q8IY92 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLX4Q8IY92 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLX4Q8IY92 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.58■□□□□ 0.72
SLX4Q8IY92 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.58■□□□□ 0.72
SLX4Q8IY92 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.58■□□□□ 0.72
SLX4Q8IY92 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.58■□□□□ 0.72
SLX4Q8IY92 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLX4Q8IY92 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLX4Q8IY92 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLX4Q8IY92 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLX4Q8IY92 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLX4Q8IY92 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLX4Q8IY92 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLX4Q8IY92 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLX4Q8IY92 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLX4Q8IY92 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLX4Q8IY92 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 AC022137.2-201ENST00000503482 481 ntBASIC19.57■□□□□ 0.72
SLX4Q8IY92 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLX4Q8IY92 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLX4Q8IY92 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLX4Q8IY92 BNIP3P1-202ENST00000550043 1585 ntBASIC19.57■□□□□ 0.72
SLX4Q8IY92 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLX4Q8IY92 AC009053.2-201ENST00000563701 2365 ntBASIC19.57■□□□□ 0.72
SLX4Q8IY92 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLX4Q8IY92 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLX4Q8IY92 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.57■□□□□ 0.72
SLX4Q8IY92 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLX4Q8IY92 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.56■□□□□ 0.72
SLX4Q8IY92 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SLX4Q8IY92 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.56■□□□□ 0.72
SLX4Q8IY92 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.56■□□□□ 0.72
SLX4Q8IY92 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLX4Q8IY92 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLX4Q8IY92 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLX4Q8IY92 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLX4Q8IY92 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLX4Q8IY92 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.56■□□□□ 0.72
SLX4Q8IY92 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLX4Q8IY92 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLX4Q8IY92 KRT8P13-201ENST00000463294 1010 ntBASIC19.56■□□□□ 0.72
SLX4Q8IY92 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.56■□□□□ 0.72
SLX4Q8IY92 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLX4Q8IY92 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SLX4Q8IY92 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.56■□□□□ 0.72
SLX4Q8IY92 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLX4Q8IY92 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SLX4Q8IY92 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLX4Q8IY92 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLX4Q8IY92 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLX4Q8IY92 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.56■□□□□ 0.72
SLX4Q8IY92 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.55■□□□□ 0.72
SLX4Q8IY92 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLX4Q8IY92 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLX4Q8IY92 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.55■□□□□ 0.72
SLX4Q8IY92 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.55■□□□□ 0.72
SLX4Q8IY92 SLED1-202ENST00000512051 380 ntBASIC19.55■□□□□ 0.72
SLX4Q8IY92 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.55■□□□□ 0.72
SLX4Q8IY92 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SLX4Q8IY92 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.55■□□□□ 0.72
SLX4Q8IY92 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SLX4Q8IY92 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.55■□□□□ 0.72
SLX4Q8IY92 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.55■□□□□ 0.72
SLX4Q8IY92 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLX4Q8IY92 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SLX4Q8IY92 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLX4Q8IY92 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLX4Q8IY92 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms