Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PDZRN4Q6ZMN7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 MIR574-201ENST00000385209 96 ntBASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 RPS2P1-201ENST00000434010 821 ntBASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 NKAPP1-205ENST00000585790 367 ntBASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 AC025062.2-201ENST00000605477 670 ntBASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDZRN4Q6ZMN7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 OR7E14P-202ENST00000530490 1290 ntBASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 AC106730.1-201ENST00000566722 1090 ntBASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 AC116407.3-201ENST00000623905 1129 ntBASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDZRN4Q6ZMN7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 SLC25A1P3-201ENST00000395415 828 ntBASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 DDX43P3-201ENST00000441064 443 ntBASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDZRN4Q6ZMN7 PMPCAP1-201ENST00000508114 1576 ntBASIC18.93■□□□□ 0.62
PDZRN4Q6ZMN7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDZRN4Q6ZMN7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDZRN4Q6ZMN7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC18.93■□□□□ 0.62
PDZRN4Q6ZMN7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDZRN4Q6ZMN7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms