Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 HYMAI-201ENST00000635591 3347 ntBASIC14.97□□□□□ -0.01
NIPAL3Q6P499 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 AC010491.1-201ENST00000563101 2797 ntBASIC14.97□□□□□ -0.01
NIPAL3Q6P499 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 AC106730.1-201ENST00000566722 1090 ntBASIC14.97□□□□□ -0.01
NIPAL3Q6P499 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 AC091167.2-201ENST00000579581 588 ntBASIC14.97□□□□□ -0.01
NIPAL3Q6P499 AC005412.3-201ENST00000580309 715 ntBASIC14.97□□□□□ -0.01
NIPAL3Q6P499 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 KRT8P39-201ENST00000396270 1433 ntBASIC14.97□□□□□ -0.01
NIPAL3Q6P499 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 AC103702.1-201ENST00000548801 2630 ntBASIC14.96□□□□□ -0.01
NIPAL3Q6P499 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 AL022342.1-201ENST00000400363 863 ntBASIC14.96□□□□□ -0.01
NIPAL3Q6P499 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 PMS2P1-201ENST00000431037 1228 ntBASIC14.96□□□□□ -0.01
NIPAL3Q6P499 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 HCG4B-203ENST00000450128 991 ntBASIC14.96□□□□□ -0.01
NIPAL3Q6P499 AL513480.1-201ENST00000451731 511 ntBASIC14.96□□□□□ -0.01
NIPAL3Q6P499 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.96□□□□□ -0.01
NIPAL3Q6P499 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.96□□□□□ -0.01
NIPAL3Q6P499 AC064836.3-201ENST00000607928 673 ntBASIC14.96□□□□□ -0.01
NIPAL3Q6P499 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 AC131009.4-201ENST00000624048 1740 ntBASIC14.96□□□□□ -0.01
NIPAL3Q6P499 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NIPAL3Q6P499 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.96□□□□□ -0.02
NIPAL3Q6P499 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NIPAL3Q6P499 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
NIPAL3Q6P499 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NIPAL3Q6P499 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
NIPAL3Q6P499 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NIPAL3Q6P499 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NIPAL3Q6P499 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
NIPAL3Q6P499 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NIPAL3Q6P499 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
NIPAL3Q6P499 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.96□□□□□ -0.02
NIPAL3Q6P499 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms