Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SCN1BQ07699 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.68□□□□□ -0.06
SCN1BQ07699 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.68□□□□□ -0.06
SCN1BQ07699 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.68□□□□□ -0.06
SCN1BQ07699 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SCN1BQ07699 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.68□□□□□ -0.06
SCN1BQ07699 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.68□□□□□ -0.06
SCN1BQ07699 TSSC2-201ENST00000450217 709 ntBASIC14.68□□□□□ -0.06
SCN1BQ07699 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.68□□□□□ -0.06
SCN1BQ07699 AC122714.2-201ENST00000502787 707 ntBASIC14.68□□□□□ -0.06
SCN1BQ07699 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.68□□□□□ -0.06
SCN1BQ07699 AC009533.2-201ENST00000543664 586 ntBASIC14.68□□□□□ -0.06
SCN1BQ07699 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.68□□□□□ -0.06
SCN1BQ07699 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SCN1BQ07699 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SCN1BQ07699 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.68□□□□□ -0.06
SCN1BQ07699 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 IER3-202ENST00000376377 1350 ntBASIC14.68□□□□□ -0.06
SCN1BQ07699 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.68□□□□□ -0.06
SCN1BQ07699 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.68□□□□□ -0.06
SCN1BQ07699 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.68□□□□□ -0.06
SCN1BQ07699 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.68□□□□□ -0.06
SCN1BQ07699 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SCN1BQ07699 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCN1BQ07699 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.67□□□□□ -0.06
SCN1BQ07699 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.67□□□□□ -0.06
SCN1BQ07699 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
SCN1BQ07699 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.67□□□□□ -0.06
SCN1BQ07699 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.67□□□□□ -0.06
SCN1BQ07699 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.67□□□□□ -0.06
SCN1BQ07699 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SCN1BQ07699 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.67□□□□□ -0.06
SCN1BQ07699 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
SCN1BQ07699 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.67□□□□□ -0.06
SCN1BQ07699 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.67□□□□□ -0.06
SCN1BQ07699 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.67□□□□□ -0.06
SCN1BQ07699 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.67□□□□□ -0.06
SCN1BQ07699 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 AC002310.6-201ENST00000624451 1377 ntBASIC14.67□□□□□ -0.06
SCN1BQ07699 AC026748.1-201ENST00000624349 3251 ntBASIC14.67□□□□□ -0.06
SCN1BQ07699 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SCN1BQ07699 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 PRAL-201ENST00000624952 3286 ntBASIC14.67□□□□□ -0.06
SCN1BQ07699 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
SCN1BQ07699 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SCN1BQ07699 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.66□□□□□ -0.06
SCN1BQ07699 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SCN1BQ07699 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SCN1BQ07699 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SCN1BQ07699 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SCN1BQ07699 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SCN1BQ07699 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SCN1BQ07699 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.66□□□□□ -0.06
SCN1BQ07699 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SCN1BQ07699 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SCN1BQ07699 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SCN1BQ07699 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SCN1BQ07699 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SCN1BQ07699 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SCN1BQ07699 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SCN1BQ07699 AL049757.1-201ENST00000616842 1596 ntBASIC14.66□□□□□ -0.06
SCN1BQ07699 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SCN1BQ07699 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SCN1BQ07699 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms