Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
GDF1P27539 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
GDF1P27539 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.86□□□□□ -0.03
GDF1P27539 TREML5P-201ENST00000421694 576 ntBASIC14.86□□□□□ -0.03
GDF1P27539 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.86□□□□□ -0.03
GDF1P27539 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 AC069120.2-201ENST00000524091 540 ntBASIC14.86□□□□□ -0.03
GDF1P27539 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.86□□□□□ -0.03
GDF1P27539 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.03
GDF1P27539 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.86□□□□□ -0.03
GDF1P27539 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.86□□□□□ -0.03
GDF1P27539 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.86□□□□□ -0.03
GDF1P27539 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.86□□□□□ -0.03
GDF1P27539 AC005498.2-205ENST00000593218 784 ntBASIC14.86□□□□□ -0.03
GDF1P27539 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.86□□□□□ -0.03
GDF1P27539 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.86□□□□□ -0.03
GDF1P27539 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.86□□□□□ -0.03
GDF1P27539 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
GDF1P27539 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
GDF1P27539 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDF1P27539 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.85□□□□□ -0.03
GDF1P27539 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
GDF1P27539 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDF1P27539 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDF1P27539 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDF1P27539 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDF1P27539 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDF1P27539 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.85□□□□□ -0.03
GDF1P27539 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
GDF1P27539 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GDF1P27539 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.85□□□□□ -0.03
GDF1P27539 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.85□□□□□ -0.03
GDF1P27539 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDF1P27539 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDF1P27539 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDF1P27539 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GDF1P27539 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.85□□□□□ -0.03
GDF1P27539 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.85□□□□□ -0.03
GDF1P27539 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.85□□□□□ -0.03
GDF1P27539 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.85□□□□□ -0.03
GDF1P27539 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.85□□□□□ -0.03
GDF1P27539 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
GDF1P27539 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.85□□□□□ -0.03
GDF1P27539 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
GDF1P27539 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.85□□□□□ -0.03
GDF1P27539 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDF1P27539 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDF1P27539 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.85□□□□□ -0.03
GDF1P27539 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.85□□□□□ -0.03
GDF1P27539 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.85□□□□□ -0.03
GDF1P27539 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.85□□□□□ -0.03
GDF1P27539 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDF1P27539 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GDF1P27539 AD000864.1-201ENST00000624076 2295 ntBASIC14.85□□□□□ -0.03
GDF1P27539 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
GDF1P27539 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.85□□□□□ -0.03
GDF1P27539 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDF1P27539 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDF1P27539 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.84□□□□□ -0.03
GDF1P27539 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
GDF1P27539 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
GDF1P27539 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GDF1P27539 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
GDF1P27539 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GDF1P27539 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GDF1P27539 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDF1P27539 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GDF1P27539 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
GDF1P27539 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.84□□□□□ -0.03
GDF1P27539 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.84□□□□□ -0.03
GDF1P27539 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.84□□□□□ -0.03
GDF1P27539 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.84□□□□□ -0.03
GDF1P27539 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.84□□□□□ -0.03
GDF1P27539 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.84□□□□□ -0.03
GDF1P27539 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.84□□□□□ -0.03
GDF1P27539 AC024267.1-201ENST00000582320 895 ntBASIC14.84□□□□□ -0.03
GDF1P27539 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
GDF1P27539 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.84□□□□□ -0.03
GDF1P27539 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.84□□□□□ -0.03
GDF1P27539 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
GDF1P27539 AC007967.4-201ENST00000614700 386 ntBASIC14.84□□□□□ -0.03
GDF1P27539 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDF1P27539 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.84□□□□□ -0.03
GDF1P27539 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms