Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.16■□□□□ 0.02
IDH3BO43837 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.16■□□□□ 0.02
IDH3BO43837 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.16■□□□□ 0.02
IDH3BO43837 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.16■□□□□ 0.02
IDH3BO43837 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
IDH3BO43837 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.15■□□□□ 0.02
IDH3BO43837 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.15■□□□□ 0.02
IDH3BO43837 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.15■□□□□ 0.02
IDH3BO43837 AL161772.1-201ENST00000610494 4412 ntBASIC15.15■□□□□ 0.02
IDH3BO43837 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.15■□□□□ 0.02
IDH3BO43837 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
IDH3BO43837 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.15■□□□□ 0.02
IDH3BO43837 AP001269.4-201ENST00000609611 512 ntBASIC15.15■□□□□ 0.02
IDH3BO43837 AC092119.3-201ENST00000612618 583 ntBASIC15.15■□□□□ 0.02
IDH3BO43837 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
IDH3BO43837 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.15■□□□□ 0.02
IDH3BO43837 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.15■□□□□ 0.02
IDH3BO43837 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.15■□□□□ 0.02
IDH3BO43837 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
IDH3BO43837 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
IDH3BO43837 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.15■□□□□ 0.02
IDH3BO43837 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
IDH3BO43837 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.15■□□□□ 0.02
IDH3BO43837 MTHFR-217ENST00000641820 1569 ntBASIC15.15■□□□□ 0.02
IDH3BO43837 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IDH3BO43837 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
IDH3BO43837 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
IDH3BO43837 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
IDH3BO43837 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.14■□□□□ 0.01
IDH3BO43837 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.14■□□□□ 0.01
IDH3BO43837 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.14■□□□□ 0.01
IDH3BO43837 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.14■□□□□ 0.01
IDH3BO43837 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.14■□□□□ 0.01
IDH3BO43837 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.14■□□□□ 0.01
IDH3BO43837 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.14■□□□□ 0.01
IDH3BO43837 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.14■□□□□ 0.01
IDH3BO43837 AL139424.1-201ENST00000607572 797 ntBASIC15.14■□□□□ 0.01
IDH3BO43837 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.14■□□□□ 0.01
IDH3BO43837 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
IDH3BO43837 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
IDH3BO43837 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
IDH3BO43837 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.14■□□□□ 0.01
IDH3BO43837 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.14■□□□□ 0.01
IDH3BO43837 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.14■□□□□ 0.01
IDH3BO43837 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.14■□□□□ 0.01
IDH3BO43837 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.14■□□□□ 0.01
IDH3BO43837 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.14■□□□□ 0.01
IDH3BO43837 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.14■□□□□ 0.01
IDH3BO43837 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IDH3BO43837 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms