Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 FAM197Y8-203ENST00000450145 560 ntBASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 AL121912.1-201ENST00000603683 238 ntBASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRDL1Q9BU40 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 HLA-A-202ENST00000376806 1854 ntBASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 AC023824.1-201ENST00000562945 2975 ntBASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 AL691432.3-201ENST00000621860 400 ntBASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.11□□□□□ -0.31
CHRDL1Q9BU40 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms