Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN18Q99952 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PTPN18Q99952 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN18Q99952 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PTPN18Q99952 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN18Q99952 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN18Q99952 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PTPN18Q99952 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN18Q99952 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN18Q99952 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN18Q99952 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPN18Q99952 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PTPN18Q99952 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN18Q99952 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPN18Q99952 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN18Q99952 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPN18Q99952 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN18Q99952 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPN18Q99952 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPN18Q99952 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN18Q99952 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
PTPN18Q99952 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN18Q99952 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPN18Q99952 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN18Q99952 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN18Q99952 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPN18Q99952 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPN18Q99952 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN18Q99952 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.53■□□□□ 0.56
PTPN18Q99952 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.53■□□□□ 0.56
PTPN18Q99952 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPN18Q99952 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.53■□□□□ 0.56
PTPN18Q99952 RN7SL560P-201ENST00000577943 264 ntBASIC18.53■□□□□ 0.56
PTPN18Q99952 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN18Q99952 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPN18Q99952 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPN18Q99952 AC138932.1-201ENST00000534164 6830 ntBASIC18.53■□□□□ 0.56
PTPN18Q99952 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PTPN18Q99952 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPN18Q99952 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN18Q99952 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN18Q99952 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN18Q99952 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
PTPN18Q99952 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN18Q99952 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.52■□□□□ 0.56
PTPN18Q99952 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.52■□□□□ 0.56
PTPN18Q99952 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PTPN18Q99952 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN18Q99952 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.52■□□□□ 0.56
PTPN18Q99952 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN18Q99952 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN18Q99952 BAATP1-201ENST00000412284 1225 ntBASIC18.52■□□□□ 0.56
PTPN18Q99952 AC134915.1-201ENST00000426461 574 ntBASIC18.52■□□□□ 0.56
PTPN18Q99952 AL355864.2-201ENST00000447420 863 ntBASIC18.52■□□□□ 0.56
PTPN18Q99952 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN18Q99952 KRT8P13-201ENST00000463294 1010 ntBASIC18.52■□□□□ 0.56
PTPN18Q99952 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN18Q99952 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.52■□□□□ 0.56
PTPN18Q99952 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.52■□□□□ 0.56
PTPN18Q99952 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
PTPN18Q99952 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN18Q99952 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.52■□□□□ 0.56
PTPN18Q99952 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN18Q99952 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.52■□□□□ 0.56
PTPN18Q99952 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.52■□□□□ 0.56
PTPN18Q99952 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.52■□□□□ 0.56
PTPN18Q99952 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PTPN18Q99952 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.52■□□□□ 0.56
PTPN18Q99952 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.52■□□□□ 0.56
PTPN18Q99952 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.52■□□□□ 0.56
PTPN18Q99952 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PTPN18Q99952 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTPN18Q99952 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.52■□□□□ 0.55
PTPN18Q99952 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.52■□□□□ 0.55
PTPN18Q99952 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTPN18Q99952 AL390961.4-201ENST00000623958 2535 ntBASIC18.52■□□□□ 0.55
PTPN18Q99952 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.52■□□□□ 0.55
PTPN18Q99952 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
PTPN18Q99952 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PTPN18Q99952 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
PTPN18Q99952 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PTPN18Q99952 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PTPN18Q99952 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN18Q99952 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN18Q99952 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN18Q99952 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PTPN18Q99952 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN18Q99952 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN18Q99952 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PTPN18Q99952 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PTPN18Q99952 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN18Q99952 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN18Q99952 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN18Q99952 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN18Q99952 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN18Q99952 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN18Q99952 INTS4P2-202ENST00000614726 2019 ntBASIC18.51■□□□□ 0.55
PTPN18Q99952 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN18Q99952 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN18Q99952 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms