Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS37AQ8NEZ2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 AL162727.3-201ENST00000635661 2787 ntBASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS37AQ8NEZ2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 AC073621.1-201ENST00000392730 636 ntBASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 RPS2P1-201ENST00000434010 821 ntBASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 AC005593.1-201ENST00000624894 515 ntBASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS37AQ8NEZ2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VPS37AQ8NEZ2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.71■□□□□ 0.1
VPS37AQ8NEZ2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VPS37AQ8NEZ2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
VPS37AQ8NEZ2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VPS37AQ8NEZ2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VPS37AQ8NEZ2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VPS37AQ8NEZ2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.71■□□□□ 0.1
VPS37AQ8NEZ2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 AC012569.1-201ENST00000591191 1524 ntBASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 RNPS1P1-201ENST00000507437 918 ntBASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 IGHV3-65-201ENST00000523210 341 ntBASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 AC010654.1-201ENST00000615722 808 ntBASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 AC008735.5-201ENST00000623544 497 ntBASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms