Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 SCARNA2-201ENST00000458748 420 ntBASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 POU5F1P6-201ENST00000466990 990 ntBASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 AL445228.2-201ENST00000605589 952 ntBASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 AL805961.1-202ENST00000641562 540 ntBASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 AL353732.1-201ENST00000569618 1459 ntBASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL1Q8N7R7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 AP001350.2-201ENST00000625104 1094 ntBASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL1Q8N7R7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCNYL1Q8N7R7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCNYL1Q8N7R7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CCNYL1Q8N7R7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCNYL1Q8N7R7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCNYL1Q8N7R7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CCNYL1Q8N7R7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCNYL1Q8N7R7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCNYL1Q8N7R7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCNYL1Q8N7R7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.27■□□□□ 0.19
CCNYL1Q8N7R7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CCNYL1Q8N7R7 AL161772.1-201ENST00000610494 4412 ntBASIC16.27■□□□□ 0.19
CCNYL1Q8N7R7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 AC107918.2-201ENST00000530817 355 ntBASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 AC087641.1-201ENST00000557561 1021 ntBASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 DBET-201ENST00000630918 3363 ntBASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms