Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 PCGF3-213ENST00000620529 1899 ntBASIC13.92□□□□□ -0.18
COL10A1Q03692 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL10A1Q03692 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.92□□□□□ -0.18
COL10A1Q03692 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL10A1Q03692 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
COL10A1Q03692 AC132872.4-202ENST00000622924 2756 ntBASIC13.92□□□□□ -0.18
COL10A1Q03692 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL10A1Q03692 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL10A1Q03692 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.92□□□□□ -0.18
COL10A1Q03692 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL10A1Q03692 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.91□□□□□ -0.18
COL10A1Q03692 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
COL10A1Q03692 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.91□□□□□ -0.18
COL10A1Q03692 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.91□□□□□ -0.18
COL10A1Q03692 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.91□□□□□ -0.18
COL10A1Q03692 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
COL10A1Q03692 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.91□□□□□ -0.18
COL10A1Q03692 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.91□□□□□ -0.18
COL10A1Q03692 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.91□□□□□ -0.18
COL10A1Q03692 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.91□□□□□ -0.18
COL10A1Q03692 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.91□□□□□ -0.18
COL10A1Q03692 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.91□□□□□ -0.18
COL10A1Q03692 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.91□□□□□ -0.18
COL10A1Q03692 SLC25A1P1-201ENST00000528351 927 ntBASIC13.91□□□□□ -0.18
COL10A1Q03692 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.91□□□□□ -0.18
COL10A1Q03692 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
COL10A1Q03692 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.91□□□□□ -0.18
COL10A1Q03692 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.91□□□□□ -0.18
COL10A1Q03692 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.91□□□□□ -0.18
COL10A1Q03692 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.91□□□□□ -0.18
COL10A1Q03692 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
COL10A1Q03692 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.91□□□□□ -0.18
COL10A1Q03692 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
COL10A1Q03692 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.91□□□□□ -0.18
COL10A1Q03692 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL10A1Q03692 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.91□□□□□ -0.18
COL10A1Q03692 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.9□□□□□ -0.18
COL10A1Q03692 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 BCAR1-209ENST00000546196 1340 ntBASIC13.9□□□□□ -0.18
COL10A1Q03692 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.9□□□□□ -0.18
COL10A1Q03692 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
COL10A1Q03692 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.9□□□□□ -0.18
COL10A1Q03692 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
COL10A1Q03692 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
COL10A1Q03692 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.9□□□□□ -0.18
COL10A1Q03692 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.9□□□□□ -0.18
COL10A1Q03692 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.9□□□□□ -0.18
COL10A1Q03692 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.9□□□□□ -0.18
COL10A1Q03692 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.9□□□□□ -0.18
COL10A1Q03692 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
COL10A1Q03692 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.9□□□□□ -0.18
COL10A1Q03692 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.9□□□□□ -0.18
COL10A1Q03692 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
COL10A1Q03692 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.9□□□□□ -0.18
COL10A1Q03692 AC004877.2-201ENST00000623941 599 ntBASIC13.9□□□□□ -0.18
COL10A1Q03692 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
COL10A1Q03692 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
COL10A1Q03692 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
COL10A1Q03692 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
COL10A1Q03692 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
COL10A1Q03692 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
COL10A1Q03692 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.9□□□□□ -0.18
COL10A1Q03692 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
COL10A1Q03692 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL10A1Q03692 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.9□□□□□ -0.19
COL10A1Q03692 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
COL10A1Q03692 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
COL10A1Q03692 AC025580.3-201ENST00000617932 1424 ntBASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms