Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CLCN2P51788 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN2P51788 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN2P51788 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN2P51788 AL603832.2-201ENST00000566195 2125 ntBASIC15.97■□□□□ 0.15
CLCN2P51788 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.97■□□□□ 0.15
CLCN2P51788 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLCN2P51788 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN2P51788 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN2P51788 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN2P51788 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN2P51788 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.96■□□□□ 0.15
CLCN2P51788 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.96■□□□□ 0.15
CLCN2P51788 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN2P51788 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCN2P51788 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN2P51788 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLCN2P51788 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN2P51788 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN2P51788 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN2P51788 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CLCN2P51788 MRPL20P1-201ENST00000400819 433 ntBASIC15.96■□□□□ 0.15
CLCN2P51788 CRYGEP-201ENST00000412192 528 ntBASIC15.96■□□□□ 0.15
CLCN2P51788 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.96■□□□□ 0.15
CLCN2P51788 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCN2P51788 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.96■□□□□ 0.15
CLCN2P51788 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CLCN2P51788 AL671883.3-201ENST00000603274 991 ntBASIC15.96■□□□□ 0.15
CLCN2P51788 AC140113.2-201ENST00000604370 208 ntBASIC15.96■□□□□ 0.15
CLCN2P51788 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
CLCN2P51788 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
CLCN2P51788 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN2P51788 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN2P51788 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN2P51788 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN2P51788 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLCN2P51788 GRK6P1-201ENST00000400595 1711 ntBASIC15.96■□□□□ 0.15
CLCN2P51788 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLCN2P51788 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.96■□□□□ 0.14
CLCN2P51788 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CLCN2P51788 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN2P51788 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLCN2P51788 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN2P51788 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN2P51788 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN2P51788 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN2P51788 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN2P51788 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN2P51788 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN2P51788 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CLCN2P51788 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN2P51788 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLCN2P51788 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN2P51788 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN2P51788 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN2P51788 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN2P51788 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN2P51788 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN2P51788 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN2P51788 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN2P51788 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN2P51788 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN2P51788 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN2P51788 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.95■□□□□ 0.14
CLCN2P51788 PRSS29P-201ENST00000440800 595 ntBASIC15.95■□□□□ 0.14
CLCN2P51788 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.95■□□□□ 0.14
CLCN2P51788 POLD2P1-201ENST00000511220 997 ntBASIC15.95■□□□□ 0.14
CLCN2P51788 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN2P51788 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCN2P51788 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN2P51788 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.95■□□□□ 0.14
CLCN2P51788 AC004790.2-201ENST00000623588 572 ntBASIC15.95■□□□□ 0.14
CLCN2P51788 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN2P51788 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN2P51788 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN2P51788 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN2P51788 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCN2P51788 TUBB8P12-201ENST00000308911 1335 ntBASIC15.94■□□□□ 0.14
CLCN2P51788 TUBB7P-202ENST00000428444 1305 ntBASIC15.94■□□□□ 0.14
CLCN2P51788 PMS2P7-201ENST00000506558 1336 ntBASIC15.94■□□□□ 0.14
CLCN2P51788 TUBB8P7-204ENST00000567960 1332 ntBASIC15.94■□□□□ 0.14
CLCN2P51788 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN2P51788 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
CLCN2P51788 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN2P51788 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN2P51788 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN2P51788 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN2P51788 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
CLCN2P51788 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN2P51788 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.94■□□□□ 0.14
CLCN2P51788 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.94■□□□□ 0.14
CLCN2P51788 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCN2P51788 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN2P51788 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN2P51788 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN2P51788 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN2P51788 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN2P51788 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN2P51788 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CLCN2P51788 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms