Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CHD1O14646 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CHD1O14646 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC25.92■■□□□ 1.74
CHD1O14646 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC25.92■■□□□ 1.74
CHD1O14646 RHBDF1P1-201ENST00000427504 1941 ntBASIC25.92■■□□□ 1.74
CHD1O14646 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
CHD1O14646 AC079178.1-201ENST00000420915 656 ntBASIC25.91■■□□□ 1.74
CHD1O14646 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC25.91■■□□□ 1.74
CHD1O14646 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC25.91■■□□□ 1.74
CHD1O14646 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC25.91■■□□□ 1.74
CHD1O14646 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CHD1O14646 AC145423.3-201ENST00000615987 467 ntBASIC25.91■■□□□ 1.74
CHD1O14646 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHD1O14646 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC25.91■■□□□ 1.74
CHD1O14646 AL121723.1-201ENST00000445194 1519 ntBASIC25.91■■□□□ 1.74
CHD1O14646 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHD1O14646 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHD1O14646 RNU1-114P-201ENST00000365297 166 ntBASIC25.91■■□□□ 1.74
CHD1O14646 RPL13AP19-201ENST00000434320 584 ntBASIC25.91■■□□□ 1.74
CHD1O14646 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC25.91■■□□□ 1.74
CHD1O14646 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC25.91■■□□□ 1.74
CHD1O14646 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC25.91■■□□□ 1.74
CHD1O14646 DRD5P1-201ENST00000456605 1438 ntBASIC25.9■■□□□ 1.74
CHD1O14646 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC25.9■■□□□ 1.74
CHD1O14646 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHD1O14646 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHD1O14646 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
CHD1O14646 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHD1O14646 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHD1O14646 SNX21-203ENST00000372541 771 ntTSL 2 BASIC25.9■■□□□ 1.74
CHD1O14646 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC25.9■■□□□ 1.74
CHD1O14646 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CHD1O14646 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC25.9■■□□□ 1.74
CHD1O14646 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC25.9■■□□□ 1.74
CHD1O14646 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC25.9■■□□□ 1.74
CHD1O14646 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
CHD1O14646 AL645939.5-201ENST00000606834 243 ntBASIC25.9■■□□□ 1.74
CHD1O14646 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC25.9■■□□□ 1.74
CHD1O14646 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC25.9■■□□□ 1.74
CHD1O14646 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC25.9■■□□□ 1.74
CHD1O14646 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC25.9■■□□□ 1.74
CHD1O14646 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHD1O14646 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHD1O14646 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHD1O14646 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
CHD1O14646 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHD1O14646 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC25.9■■□□□ 1.74
CHD1O14646 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC25.9■■□□□ 1.74
CHD1O14646 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CHD1O14646 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
CHD1O14646 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CHD1O14646 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC25.89■■□□□ 1.74
CHD1O14646 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC25.89■■□□□ 1.74
CHD1O14646 RN7SL736P-201ENST00000613111 269 ntBASIC25.89■■□□□ 1.74
CHD1O14646 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CHD1O14646 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC25.89■■□□□ 1.74
CHD1O14646 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC25.89■■□□□ 1.74
CHD1O14646 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CHD1O14646 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHD1O14646 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHD1O14646 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CHD1O14646 AL133466.1-201ENST00000447582 150 ntBASIC25.88■■□□□ 1.73
CHD1O14646 SUPT4H1P2-201ENST00000501248 353 ntBASIC25.88■■□□□ 1.73
CHD1O14646 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CHD1O14646 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
CHD1O14646 KLK11-210ENST00000600362 759 ntTSL 3 BASIC25.88■■□□□ 1.73
CHD1O14646 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
CHD1O14646 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHD1O14646 AC092053.1-201ENST00000605787 1936 ntBASIC25.88■■□□□ 1.73
CHD1O14646 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHD1O14646 AL354989.2-201ENST00000435838 1540 ntBASIC25.88■■□□□ 1.73
CHD1O14646 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHD1O14646 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CHD1O14646 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
CHD1O14646 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHD1O14646 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
CHD1O14646 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC25.88■■□□□ 1.73
CHD1O14646 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC25.88■■□□□ 1.73
CHD1O14646 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CHD1O14646 AC093813.1-201ENST00000605066 256 ntBASIC25.88■■□□□ 1.73
CHD1O14646 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CHD1O14646 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CHD1O14646 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CHD1O14646 BOC-212ENST00000485230 2173 ntTSL 2 BASIC25.88■■□□□ 1.73
CHD1O14646 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CHD1O14646 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC25.88■■□□□ 1.73
CHD1O14646 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
CHD1O14646 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CHD1O14646 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
CHD1O14646 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC25.87■■□□□ 1.73
CHD1O14646 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CHD1O14646 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC25.87■■□□□ 1.73
CHD1O14646 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CHD1O14646 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CHD1O14646 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CHD1O14646 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC25.87■■□□□ 1.73
CHD1O14646 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CHD1O14646 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC25.87■■□□□ 1.73
CHD1O14646 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
CHD1O14646 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms