Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 GGTLC5P-201ENST00000617623 998 ntBASIC15.42■□□□□ 0.06
CLCA1A8K7I4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CLCA1A8K7I4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 PI4KAP1-204ENST00000612579 1703 ntBASIC15.41■□□□□ 0.06
CLCA1A8K7I4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 MRPL20P1-201ENST00000400819 433 ntBASIC15.41■□□□□ 0.06
CLCA1A8K7I4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 PRSS29P-201ENST00000440800 595 ntBASIC15.41■□□□□ 0.06
CLCA1A8K7I4 VN2R19P-201ENST00000442399 1052 ntBASIC15.41■□□□□ 0.06
CLCA1A8K7I4 HLA-J-202ENST00000469281 1241 ntBASIC15.41■□□□□ 0.06
CLCA1A8K7I4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 AC040169.1-201ENST00000565382 521 ntBASIC15.41■□□□□ 0.06
CLCA1A8K7I4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCA1A8K7I4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms