Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 AC016734.2-201ENST00000624325 1377 ntBASIC14.34□□□□□ -0.11
SHISA3A0PJX4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHISA3A0PJX4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHISA3A0PJX4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SHISA3A0PJX4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SHISA3A0PJX4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SHISA3A0PJX4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SHISA3A0PJX4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHISA3A0PJX4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHISA3A0PJX4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 IGHV3-47-201ENST00000425060 335 ntBASIC14.33□□□□□ -0.12
SHISA3A0PJX4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 ABCD1P5-201ENST00000445663 754 ntBASIC14.33□□□□□ -0.12
SHISA3A0PJX4 MINOS1P3-201ENST00000457048 203 ntBASIC14.33□□□□□ -0.12
SHISA3A0PJX4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 AL136038.3-201ENST00000561909 1096 ntBASIC14.33□□□□□ -0.12
SHISA3A0PJX4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.33□□□□□ -0.12
SHISA3A0PJX4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 AL359258.3-201ENST00000622910 2331 ntBASIC14.32□□□□□ -0.12
SHISA3A0PJX4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 AC087481.3-201ENST00000602886 1894 ntBASIC14.32□□□□□ -0.12
SHISA3A0PJX4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHISA3A0PJX4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms