Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 HCG4-201ENST00000418983 998 ntBASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 AC108073.2-201ENST00000464002 357 ntBASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 AC093909.1-201ENST00000504731 1122 ntBASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 AC107918.2-201ENST00000530817 355 ntBASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 AC005052.1-201ENST00000625181 2492 ntBASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 KRT8P39-201ENST00000396270 1433 ntBASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
POLR1DQ9Y2S0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 SBF1P1-201ENST00000444527 5631 ntBASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 HNRNPDP1-201ENST00000439535 754 ntBASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 MIR4492-201ENST00000581627 80 ntBASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 AL031008.1-201ENST00000619963 541 ntBASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 FAM215A-202ENST00000632077 792 ntBASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 GGT3P-204ENST00000453783 1664 ntBASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
POLR1DQ9Y2S0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR1DQ9Y2S0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR1DQ9Y2S0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR1DQ9Y2S0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR1DQ9Y2S0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR1DQ9Y2S0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR1DQ9Y2S0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.73□□□□□ -0.05
POLR1DQ9Y2S0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.73□□□□□ -0.05
POLR1DQ9Y2S0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
POLR1DQ9Y2S0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
POLR1DQ9Y2S0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR1DQ9Y2S0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR1DQ9Y2S0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms