Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
TRBC1P01850 U82695.1-201ENST00000635752 1889 ntBASIC16.46■□□□□ 0.22
TRBC1P01850 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBC1P01850 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBC1P01850 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBC1P01850 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
TRBC1P01850 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.45■□□□□ 0.22
TRBC1P01850 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBC1P01850 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBC1P01850 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBC1P01850 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBC1P01850 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBC1P01850 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBC1P01850 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRBC1P01850 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.45■□□□□ 0.22
TRBC1P01850 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBC1P01850 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.45■□□□□ 0.22
TRBC1P01850 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.45■□□□□ 0.22
TRBC1P01850 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.45■□□□□ 0.22
TRBC1P01850 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.45■□□□□ 0.22
TRBC1P01850 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBC1P01850 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.45■□□□□ 0.22
TRBC1P01850 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBC1P01850 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBC1P01850 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
TRBC1P01850 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBC1P01850 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBC1P01850 SPTSSB-204ENST00000617024 1292 ntBASIC16.45■□□□□ 0.22
TRBC1P01850 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.45■□□□□ 0.22
TRBC1P01850 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBC1P01850 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRBC1P01850 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRBC1P01850 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBC1P01850 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
TRBC1P01850 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRBC1P01850 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBC1P01850 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBC1P01850 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBC1P01850 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBC1P01850 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBC1P01850 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBC1P01850 AL589702.1-201ENST00000641229 1509 ntBASIC16.45■□□□□ 0.22
TRBC1P01850 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBC1P01850 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRBC1P01850 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRBC1P01850 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TRBC1P01850 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TRBC1P01850 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBC1P01850 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBC1P01850 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.44■□□□□ 0.22
TRBC1P01850 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 AC098859.1-201ENST00000502915 1238 ntBASIC16.44■□□□□ 0.22
TRBC1P01850 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBC1P01850 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBC1P01850 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.44■□□□□ 0.22
TRBC1P01850 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.44■□□□□ 0.22
TRBC1P01850 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBC1P01850 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRBC1P01850 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRBC1P01850 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBC1P01850 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBC1P01850 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBC1P01850 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBC1P01850 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBC1P01850 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBC1P01850 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBC1P01850 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.43■□□□□ 0.22
TRBC1P01850 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBC1P01850 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRBC1P01850 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBC1P01850 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRBC1P01850 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBC1P01850 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBC1P01850 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRBC1P01850 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBC1P01850 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRBC1P01850 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBC1P01850 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBC1P01850 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBC1P01850 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
TRBC1P01850 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms