Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 AL080243.2-201ENST00000418783 582 ntBASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 RN7SL618P-201ENST00000477850 296 ntBASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3BA6NDS4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 GGT4P-201ENST00000623672 1708 ntBASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 AC007541.1-201ENST00000570282 1469 ntBASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 AC135586.1-201ENST00000539323 574 ntBASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3BA6NDS4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms