Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.76■□□□□ 0.43
HLA-DRB4X5D2U9 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DRB4X5D2U9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRB4X5D2U9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRB4X5D2U9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRB4X5D2U9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRB4X5D2U9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRB4X5D2U9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HLA-DRB4X5D2U9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HLA-DRB4X5D2U9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRB4X5D2U9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRB4X5D2U9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRB4X5D2U9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.74■□□□□ 0.43
HLA-DRB4X5D2U9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRB4X5D2U9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRB4X5D2U9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.74■□□□□ 0.43
HLA-DRB4X5D2U9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRB4X5D2U9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
HLA-DRB4X5D2U9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DRB4X5D2U9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DRB4X5D2U9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DRB4X5D2U9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRB4X5D2U9 KRT18P10-201ENST00000388836 1287 ntBASIC17.73■□□□□ 0.43
HLA-DRB4X5D2U9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRB4X5D2U9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRB4X5D2U9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRB4X5D2U9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DRB4X5D2U9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRB4X5D2U9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRB4X5D2U9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRB4X5D2U9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 AC097639.1-201ENST00000565519 1891 ntBASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 ABHD17AP5-201ENST00000580133 923 ntBASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DRB4X5D2U9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HLA-DRB4X5D2U9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DRB4X5D2U9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DRB4X5D2U9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HLA-DRB4X5D2U9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DRB4X5D2U9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DRB4X5D2U9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DRB4X5D2U9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DRB4X5D2U9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DRB4X5D2U9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DRB4X5D2U9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DRB4X5D2U9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DRB4X5D2U9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DRB4X5D2U9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DRB4X5D2U9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DRB4X5D2U9 AL592293.1-201ENST00000502889 1188 ntBASIC17.7■□□□□ 0.42
HLA-DRB4X5D2U9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.7■□□□□ 0.42
HLA-DRB4X5D2U9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DRB4X5D2U9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DRB4X5D2U9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DRB4X5D2U9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DRB4X5D2U9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DRB4X5D2U9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HLA-DRB4X5D2U9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HLA-DRB4X5D2U9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DRB4X5D2U9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DRB4X5D2U9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DRB4X5D2U9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DRB4X5D2U9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DRB4X5D2U9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRB4X5D2U9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRB4X5D2U9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRB4X5D2U9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRB4X5D2U9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRB4X5D2U9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRB4X5D2U9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.67■□□□□ 0.42
HLA-DRB4X5D2U9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HLA-DRB4X5D2U9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DRB4X5D2U9 AC012676.1-201ENST00000574705 1949 ntBASIC17.67■□□□□ 0.42
HLA-DRB4X5D2U9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DRB4X5D2U9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HLA-DRB4X5D2U9 U85056.1-201ENST00000616429 682 ntBASIC17.67■□□□□ 0.42
HLA-DRB4X5D2U9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DRB4X5D2U9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
HLA-DRB4X5D2U9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DRB4X5D2U9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DRB4X5D2U9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DRB4X5D2U9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.66■□□□□ 0.42
HLA-DRB4X5D2U9 LINC00543-201ENST00000567234 1845 ntBASIC17.66■□□□□ 0.42
HLA-DRB4X5D2U9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DRB4X5D2U9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms