Protein–RNA interactions for Protein: Q9Y572

RIPK3, Receptor-interacting serine/threonine-protein kinase 3, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3Q9Y572 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RIPK3Q9Y572 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
RIPK3Q9Y572 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.37■■□□□ 1.97
RIPK3Q9Y572 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
RIPK3Q9Y572 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.36■■□□□ 1.97
RIPK3Q9Y572 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RIPK3Q9Y572 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
RIPK3Q9Y572 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.36■■□□□ 1.97
RIPK3Q9Y572 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.36■■□□□ 1.97
RIPK3Q9Y572 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC27.36■■□□□ 1.97
RIPK3Q9Y572 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.35■■□□□ 1.97
RIPK3Q9Y572 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.35■■□□□ 1.97
RIPK3Q9Y572 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC27.35■■□□□ 1.97
RIPK3Q9Y572 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
RIPK3Q9Y572 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RIPK3Q9Y572 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.34■■□□□ 1.97
RIPK3Q9Y572 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RIPK3Q9Y572 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.34■■□□□ 1.97
RIPK3Q9Y572 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RIPK3Q9Y572 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
RIPK3Q9Y572 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
RIPK3Q9Y572 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
RIPK3Q9Y572 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
RIPK3Q9Y572 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27.33■■□□□ 1.97
RIPK3Q9Y572 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC27.33■■□□□ 1.97
RIPK3Q9Y572 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RIPK3Q9Y572 MIR4281-201ENST00000580852 62 ntBASIC27.33■■□□□ 1.97
RIPK3Q9Y572 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RIPK3Q9Y572 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.32■■□□□ 1.96
RIPK3Q9Y572 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RIPK3Q9Y572 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RIPK3Q9Y572 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RIPK3Q9Y572 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RIPK3Q9Y572 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
RIPK3Q9Y572 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC27.31■■□□□ 1.96
RIPK3Q9Y572 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RIPK3Q9Y572 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RIPK3Q9Y572 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.3■■□□□ 1.96
RIPK3Q9Y572 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
RIPK3Q9Y572 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RIPK3Q9Y572 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27.3■■□□□ 1.96
RIPK3Q9Y572 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RIPK3Q9Y572 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RIPK3Q9Y572 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RIPK3Q9Y572 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RIPK3Q9Y572 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.29■■□□□ 1.96
RIPK3Q9Y572 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
RIPK3Q9Y572 TSPY9P-201ENST00000440215 945 ntBASIC27.29■■□□□ 1.96
RIPK3Q9Y572 TSPY11P-201ENST00000442607 1045 ntBASIC27.29■■□□□ 1.96
RIPK3Q9Y572 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
RIPK3Q9Y572 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC27.29■■□□□ 1.96
RIPK3Q9Y572 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.29■■□□□ 1.96
RIPK3Q9Y572 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
RIPK3Q9Y572 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RIPK3Q9Y572 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RIPK3Q9Y572 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RIPK3Q9Y572 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RIPK3Q9Y572 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.28■■□□□ 1.96
RIPK3Q9Y572 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.28■■□□□ 1.96
RIPK3Q9Y572 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.28■■□□□ 1.96
RIPK3Q9Y572 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
RIPK3Q9Y572 KRT16P3-201ENST00000439127 1283 ntBASIC27.27■■□□□ 1.96
RIPK3Q9Y572 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27.27■■□□□ 1.96
RIPK3Q9Y572 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RIPK3Q9Y572 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
RIPK3Q9Y572 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.26■■□□□ 1.96
RIPK3Q9Y572 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RIPK3Q9Y572 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RIPK3Q9Y572 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
RIPK3Q9Y572 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
RIPK3Q9Y572 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
RIPK3Q9Y572 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIPK3Q9Y572 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.25■■□□□ 1.95
RIPK3Q9Y572 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC27.25■■□□□ 1.95
RIPK3Q9Y572 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.25■■□□□ 1.95
RIPK3Q9Y572 AC092028.1-203ENST00000608262 953 ntBASIC27.25■■□□□ 1.95
RIPK3Q9Y572 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RIPK3Q9Y572 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIPK3Q9Y572 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.25■■□□□ 1.95
RIPK3Q9Y572 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIPK3Q9Y572 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIPK3Q9Y572 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RIPK3Q9Y572 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
RIPK3Q9Y572 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
RIPK3Q9Y572 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
RIPK3Q9Y572 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC27.24■■□□□ 1.95
RIPK3Q9Y572 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.24■■□□□ 1.95
RIPK3Q9Y572 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RIPK3Q9Y572 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RIPK3Q9Y572 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
RIPK3Q9Y572 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RIPK3Q9Y572 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.23■■□□□ 1.95
RIPK3Q9Y572 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RIPK3Q9Y572 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RIPK3Q9Y572 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RIPK3Q9Y572 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
RIPK3Q9Y572 ERN1-208ENST00000606895 2068 ntBASIC27.22■■□□□ 1.95
RIPK3Q9Y572 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.22■■□□□ 1.95
RIPK3Q9Y572 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RIPK3Q9Y572 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms