Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLPBQ9H078 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLPBQ9H078 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLPBQ9H078 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.81■■□□□ 1.4
CLPBQ9H078 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLPBQ9H078 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.81■■□□□ 1.4
CLPBQ9H078 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLPBQ9H078 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLPBQ9H078 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLPBQ9H078 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLPBQ9H078 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLPBQ9H078 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CLPBQ9H078 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLPBQ9H078 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLPBQ9H078 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
CLPBQ9H078 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLPBQ9H078 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLPBQ9H078 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.8■■□□□ 1.4
CLPBQ9H078 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLPBQ9H078 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CLPBQ9H078 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLPBQ9H078 YBX1P4-201ENST00000392794 808 ntBASIC23.79■■□□□ 1.4
CLPBQ9H078 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLPBQ9H078 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.79■■□□□ 1.4
CLPBQ9H078 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CLPBQ9H078 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLPBQ9H078 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLPBQ9H078 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
CLPBQ9H078 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLPBQ9H078 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLPBQ9H078 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.77■■□□□ 1.4
CLPBQ9H078 AC087393.1-201ENST00000582896 145 ntBASIC23.77■■□□□ 1.4
CLPBQ9H078 MIR4508-201ENST00000584178 70 ntBASIC23.77■■□□□ 1.4
CLPBQ9H078 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLPBQ9H078 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CLPBQ9H078 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.76■■□□□ 1.39
CLPBQ9H078 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLPBQ9H078 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLPBQ9H078 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLPBQ9H078 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLPBQ9H078 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.75■■□□□ 1.39
CLPBQ9H078 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CLPBQ9H078 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
CLPBQ9H078 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
CLPBQ9H078 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLPBQ9H078 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLPBQ9H078 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLPBQ9H078 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CLPBQ9H078 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLPBQ9H078 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CLPBQ9H078 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.74■■□□□ 1.39
CLPBQ9H078 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLPBQ9H078 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLPBQ9H078 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLPBQ9H078 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLPBQ9H078 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.74■■□□□ 1.39
CLPBQ9H078 RPS2P7-201ENST00000447334 885 ntBASIC23.74■■□□□ 1.39
CLPBQ9H078 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.74■■□□□ 1.39
CLPBQ9H078 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLPBQ9H078 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLPBQ9H078 AC009299.2-201ENST00000482477 511 ntBASIC23.73■■□□□ 1.39
CLPBQ9H078 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLPBQ9H078 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLPBQ9H078 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.73■■□□□ 1.39
CLPBQ9H078 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.73■■□□□ 1.39
CLPBQ9H078 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CLPBQ9H078 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.72■■□□□ 1.39
CLPBQ9H078 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.72■■□□□ 1.39
CLPBQ9H078 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
CLPBQ9H078 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CLPBQ9H078 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.72■■□□□ 1.39
CLPBQ9H078 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.71■■□□□ 1.39
CLPBQ9H078 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLPBQ9H078 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLPBQ9H078 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLPBQ9H078 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLPBQ9H078 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CLPBQ9H078 AC019171.1-201ENST00000601251 1056 ntBASIC23.71■■□□□ 1.39
CLPBQ9H078 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLPBQ9H078 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CLPBQ9H078 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
CLPBQ9H078 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CLPBQ9H078 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLPBQ9H078 AC103724.3-201ENST00000564481 992 ntBASIC23.7■■□□□ 1.38
CLPBQ9H078 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLPBQ9H078 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.7■■□□□ 1.38
CLPBQ9H078 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.7■■□□□ 1.38
CLPBQ9H078 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLPBQ9H078 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.7■■□□□ 1.38
CLPBQ9H078 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLPBQ9H078 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLPBQ9H078 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.69■■□□□ 1.38
CLPBQ9H078 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.69■■□□□ 1.38
CLPBQ9H078 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLPBQ9H078 AC097639.1-201ENST00000565519 1891 ntBASIC23.68■■□□□ 1.38
CLPBQ9H078 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLPBQ9H078 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLPBQ9H078 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
CLPBQ9H078 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLPBQ9H078 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms