Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NICN1Q9BSH3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NICN1Q9BSH3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.27■□□□□ 0.84
NICN1Q9BSH3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NICN1Q9BSH3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NICN1Q9BSH3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NICN1Q9BSH3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.27■□□□□ 0.84
NICN1Q9BSH3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NICN1Q9BSH3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.27■□□□□ 0.84
NICN1Q9BSH3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.27■□□□□ 0.84
NICN1Q9BSH3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.27■□□□□ 0.84
NICN1Q9BSH3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NICN1Q9BSH3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.26■□□□□ 0.83
NICN1Q9BSH3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NICN1Q9BSH3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NICN1Q9BSH3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NICN1Q9BSH3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NICN1Q9BSH3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NICN1Q9BSH3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.26■□□□□ 0.83
NICN1Q9BSH3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NICN1Q9BSH3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NICN1Q9BSH3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NICN1Q9BSH3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NICN1Q9BSH3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
NICN1Q9BSH3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NICN1Q9BSH3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NICN1Q9BSH3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.25■□□□□ 0.83
NICN1Q9BSH3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NICN1Q9BSH3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NICN1Q9BSH3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
NICN1Q9BSH3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NICN1Q9BSH3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NICN1Q9BSH3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NICN1Q9BSH3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NICN1Q9BSH3 AC126177.7-201ENST00000547904 679 ntBASIC20.24■□□□□ 0.83
NICN1Q9BSH3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NICN1Q9BSH3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NICN1Q9BSH3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NICN1Q9BSH3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NICN1Q9BSH3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NICN1Q9BSH3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NICN1Q9BSH3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NICN1Q9BSH3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NICN1Q9BSH3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.23■□□□□ 0.83
NICN1Q9BSH3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NICN1Q9BSH3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.23■□□□□ 0.83
NICN1Q9BSH3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NICN1Q9BSH3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NICN1Q9BSH3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NICN1Q9BSH3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.22■□□□□ 0.83
NICN1Q9BSH3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NICN1Q9BSH3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NICN1Q9BSH3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.21■□□□□ 0.83
NICN1Q9BSH3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NICN1Q9BSH3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
NICN1Q9BSH3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NICN1Q9BSH3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NICN1Q9BSH3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NICN1Q9BSH3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NICN1Q9BSH3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.21■□□□□ 0.83
NICN1Q9BSH3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NICN1Q9BSH3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NICN1Q9BSH3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NICN1Q9BSH3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.2■□□□□ 0.82
NICN1Q9BSH3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.2■□□□□ 0.82
NICN1Q9BSH3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NICN1Q9BSH3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.2■□□□□ 0.82
NICN1Q9BSH3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
NICN1Q9BSH3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NICN1Q9BSH3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NICN1Q9BSH3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NICN1Q9BSH3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NICN1Q9BSH3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NICN1Q9BSH3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NICN1Q9BSH3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NICN1Q9BSH3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NICN1Q9BSH3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.18■□□□□ 0.82
NICN1Q9BSH3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NICN1Q9BSH3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NICN1Q9BSH3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NICN1Q9BSH3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NICN1Q9BSH3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NICN1Q9BSH3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NICN1Q9BSH3 LINC00543-201ENST00000567234 1845 ntBASIC20.17■□□□□ 0.82
NICN1Q9BSH3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.17■□□□□ 0.82
NICN1Q9BSH3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NICN1Q9BSH3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NICN1Q9BSH3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NICN1Q9BSH3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NICN1Q9BSH3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NICN1Q9BSH3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
NICN1Q9BSH3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NICN1Q9BSH3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NICN1Q9BSH3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NICN1Q9BSH3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.16■□□□□ 0.82
NICN1Q9BSH3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.16■□□□□ 0.82
NICN1Q9BSH3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NICN1Q9BSH3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NICN1Q9BSH3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NICN1Q9BSH3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms