Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
APH1AQ96BI3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
APH1AQ96BI3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
APH1AQ96BI3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
APH1AQ96BI3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APH1AQ96BI3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
APH1AQ96BI3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
APH1AQ96BI3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.03■□□□□ 0.96
APH1AQ96BI3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
APH1AQ96BI3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
APH1AQ96BI3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
APH1AQ96BI3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.02■□□□□ 0.96
APH1AQ96BI3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APH1AQ96BI3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
APH1AQ96BI3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
APH1AQ96BI3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APH1AQ96BI3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.02■□□□□ 0.96
APH1AQ96BI3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.02■□□□□ 0.96
APH1AQ96BI3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.02■□□□□ 0.96
APH1AQ96BI3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APH1AQ96BI3 PVT1_1.1-201ENST00000615125 194 ntBASIC21.02■□□□□ 0.96
APH1AQ96BI3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
APH1AQ96BI3 KRT8P33-201ENST00000508125 1423 ntBASIC21.02■□□□□ 0.96
APH1AQ96BI3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.02■□□□□ 0.95
APH1AQ96BI3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
APH1AQ96BI3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
APH1AQ96BI3 YBX1P4-201ENST00000392794 808 ntBASIC21.01■□□□□ 0.95
APH1AQ96BI3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
APH1AQ96BI3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.01■□□□□ 0.95
APH1AQ96BI3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APH1AQ96BI3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
APH1AQ96BI3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APH1AQ96BI3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
APH1AQ96BI3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
APH1AQ96BI3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APH1AQ96BI3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21■□□□□ 0.95
APH1AQ96BI3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21■□□□□ 0.95
APH1AQ96BI3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APH1AQ96BI3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
APH1AQ96BI3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APH1AQ96BI3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
APH1AQ96BI3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
APH1AQ96BI3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.99■□□□□ 0.95
APH1AQ96BI3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
APH1AQ96BI3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
APH1AQ96BI3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
APH1AQ96BI3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
APH1AQ96BI3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
APH1AQ96BI3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
APH1AQ96BI3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
APH1AQ96BI3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
APH1AQ96BI3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APH1AQ96BI3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.97■□□□□ 0.95
APH1AQ96BI3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APH1AQ96BI3 RARRES2P1-201ENST00000474487 481 ntBASIC20.97■□□□□ 0.95
APH1AQ96BI3 AC022616.5-201ENST00000518796 181 ntBASIC20.97■□□□□ 0.95
APH1AQ96BI3 MIR4508-201ENST00000584178 70 ntBASIC20.97■□□□□ 0.95
APH1AQ96BI3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.97■□□□□ 0.95
APH1AQ96BI3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APH1AQ96BI3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.97■□□□□ 0.95
APH1AQ96BI3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APH1AQ96BI3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APH1AQ96BI3 AL592295.1-201ENST00000400984 884 ntBASIC20.96■□□□□ 0.95
APH1AQ96BI3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
APH1AQ96BI3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.96■□□□□ 0.95
APH1AQ96BI3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.96■□□□□ 0.95
APH1AQ96BI3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
APH1AQ96BI3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
APH1AQ96BI3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
APH1AQ96BI3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
APH1AQ96BI3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
APH1AQ96BI3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
APH1AQ96BI3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.95■□□□□ 0.94
APH1AQ96BI3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
APH1AQ96BI3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
APH1AQ96BI3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
APH1AQ96BI3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
APH1AQ96BI3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
APH1AQ96BI3 AC103834.1-201ENST00000520383 144 ntBASIC20.94■□□□□ 0.94
APH1AQ96BI3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
APH1AQ96BI3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APH1AQ96BI3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.93■□□□□ 0.94
APH1AQ96BI3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
APH1AQ96BI3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
APH1AQ96BI3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
APH1AQ96BI3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
APH1AQ96BI3 FOXO3B-201ENST00000395675 1928 ntBASIC20.93■□□□□ 0.94
APH1AQ96BI3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
APH1AQ96BI3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APH1AQ96BI3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APH1AQ96BI3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.93■□□□□ 0.94
APH1AQ96BI3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APH1AQ96BI3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APH1AQ96BI3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APH1AQ96BI3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.92■□□□□ 0.94
APH1AQ96BI3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APH1AQ96BI3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
APH1AQ96BI3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
APH1AQ96BI3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
APH1AQ96BI3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms