Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 AC137630.3-201ENST00000607245 391 ntBASIC26.13■■□□□ 1.77
TMEM40Q8WWA1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TMEM40Q8WWA1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.13■■□□□ 1.77
TMEM40Q8WWA1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TMEM40Q8WWA1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TMEM40Q8WWA1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.12■■□□□ 1.77
TMEM40Q8WWA1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM40Q8WWA1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM40Q8WWA1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.11■■□□□ 1.77
TMEM40Q8WWA1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM40Q8WWA1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
TMEM40Q8WWA1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM40Q8WWA1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.11■■□□□ 1.77
TMEM40Q8WWA1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM40Q8WWA1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
TMEM40Q8WWA1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM40Q8WWA1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
TMEM40Q8WWA1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
TMEM40Q8WWA1 UNC93B8-201ENST00000511903 705 ntBASIC26.1■■□□□ 1.77
TMEM40Q8WWA1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.1■■□□□ 1.77
TMEM40Q8WWA1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TMEM40Q8WWA1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.1■■□□□ 1.77
TMEM40Q8WWA1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
TMEM40Q8WWA1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TMEM40Q8WWA1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.09■■□□□ 1.77
TMEM40Q8WWA1 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.09■■□□□ 1.77
TMEM40Q8WWA1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.09■■□□□ 1.77
TMEM40Q8WWA1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TMEM40Q8WWA1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM40Q8WWA1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM40Q8WWA1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM40Q8WWA1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM40Q8WWA1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM40Q8WWA1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM40Q8WWA1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM40Q8WWA1 MIR4281-201ENST00000580852 62 ntBASIC26.08■■□□□ 1.77
TMEM40Q8WWA1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
TMEM40Q8WWA1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM40Q8WWA1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
TMEM40Q8WWA1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
TMEM40Q8WWA1 AC021242.3-201ENST00000607598 1377 ntBASIC26.07■■□□□ 1.76
TMEM40Q8WWA1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM40Q8WWA1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM40Q8WWA1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM40Q8WWA1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM40Q8WWA1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TMEM40Q8WWA1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.06■■□□□ 1.76
TMEM40Q8WWA1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.06■■□□□ 1.76
TMEM40Q8WWA1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.06■■□□□ 1.76
TMEM40Q8WWA1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TMEM40Q8WWA1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TMEM40Q8WWA1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TMEM40Q8WWA1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.05■■□□□ 1.76
TMEM40Q8WWA1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.05■■□□□ 1.76
TMEM40Q8WWA1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TMEM40Q8WWA1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TMEM40Q8WWA1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
TMEM40Q8WWA1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.04■■□□□ 1.76
TMEM40Q8WWA1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TMEM40Q8WWA1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TMEM40Q8WWA1 ERN1-208ENST00000606895 2068 ntBASIC26.04■■□□□ 1.76
TMEM40Q8WWA1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.04■■□□□ 1.76
TMEM40Q8WWA1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.04■■□□□ 1.76
TMEM40Q8WWA1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.04■■□□□ 1.76
TMEM40Q8WWA1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.04■■□□□ 1.76
TMEM40Q8WWA1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TMEM40Q8WWA1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM40Q8WWA1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM40Q8WWA1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM40Q8WWA1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.03■■□□□ 1.76
TMEM40Q8WWA1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM40Q8WWA1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
TMEM40Q8WWA1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.02■■□□□ 1.76
TMEM40Q8WWA1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.02■■□□□ 1.76
TMEM40Q8WWA1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.02■■□□□ 1.76
TMEM40Q8WWA1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.02■■□□□ 1.76
TMEM40Q8WWA1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
TMEM40Q8WWA1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM40Q8WWA1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM40Q8WWA1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
TMEM40Q8WWA1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM40Q8WWA1 AC096887.2-201ENST00000623443 1957 ntBASIC26.01■■□□□ 1.75
TMEM40Q8WWA1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
TMEM40Q8WWA1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
TMEM40Q8WWA1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TMEM40Q8WWA1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26■■□□□ 1.75
TMEM40Q8WWA1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26■■□□□ 1.75
TMEM40Q8WWA1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26■■□□□ 1.75
TMEM40Q8WWA1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26■■□□□ 1.75
TMEM40Q8WWA1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TMEM40Q8WWA1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26■■□□□ 1.75
TMEM40Q8WWA1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TMEM40Q8WWA1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.99■■□□□ 1.75
TMEM40Q8WWA1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
TMEM40Q8WWA1 TSPY9P-201ENST00000440215 945 ntBASIC25.99■■□□□ 1.75
TMEM40Q8WWA1 TSPY11P-201ENST00000442607 1045 ntBASIC25.99■■□□□ 1.75
TMEM40Q8WWA1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TMEM40Q8WWA1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TMEM40Q8WWA1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TMEM40Q8WWA1 KRT16P3-201ENST00000439127 1283 ntBASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms