Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AL031432.3-201ENST00000607698 485 ntBASIC34.59■■■■□ 3.13
UBR1Q8IWV7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC34.59■■■■□ 3.13
UBR1Q8IWV7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC34.59■■■■□ 3.13
UBR1Q8IWV7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
UBR1Q8IWV7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
UBR1Q8IWV7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC34.58■■■■□ 3.13
UBR1Q8IWV7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC34.58■■■■□ 3.13
UBR1Q8IWV7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC34.58■■■■□ 3.13
UBR1Q8IWV7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC34.58■■■■□ 3.13
UBR1Q8IWV7 SUDS3P1-201ENST00000505831 966 ntBASIC34.58■■■■□ 3.13
UBR1Q8IWV7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC34.58■■■■□ 3.13
UBR1Q8IWV7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
UBR1Q8IWV7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
UBR1Q8IWV7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC34.57■■■■□ 3.12
UBR1Q8IWV7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC34.57■■■■□ 3.12
UBR1Q8IWV7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
UBR1Q8IWV7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC34.56■■■■□ 3.12
UBR1Q8IWV7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
UBR1Q8IWV7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC34.55■■■■□ 3.12
UBR1Q8IWV7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
UBR1Q8IWV7 GAK-223ENST00000628912 497 ntTSL 5 BASIC34.55■■■■□ 3.12
UBR1Q8IWV7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
UBR1Q8IWV7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
UBR1Q8IWV7 BX255925.1-201ENST00000566954 1854 ntBASIC34.54■■■■□ 3.12
UBR1Q8IWV7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
UBR1Q8IWV7 AF131216.4-201ENST00000638924 1588 ntBASIC34.53■■■■□ 3.12
UBR1Q8IWV7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
UBR1Q8IWV7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
UBR1Q8IWV7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC34.52■■■■□ 3.12
UBR1Q8IWV7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
UBR1Q8IWV7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
UBR1Q8IWV7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
UBR1Q8IWV7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
UBR1Q8IWV7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC34.51■■■■□ 3.12
UBR1Q8IWV7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
UBR1Q8IWV7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
UBR1Q8IWV7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
UBR1Q8IWV7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC34.51■■■■□ 3.12
UBR1Q8IWV7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
UBR1Q8IWV7 AC135279.3-201ENST00000610945 1311 ntBASIC34.51■■■■□ 3.11
UBR1Q8IWV7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
UBR1Q8IWV7 AC142472.1-201ENST00000612013 1741 ntBASIC34.51■■■■□ 3.11
UBR1Q8IWV7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC34.5■■■■□ 3.11
UBR1Q8IWV7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC34.5■■■■□ 3.11
UBR1Q8IWV7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC34.5■■■■□ 3.11
UBR1Q8IWV7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
UBR1Q8IWV7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC34.5■■■■□ 3.11
UBR1Q8IWV7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC34.5■■■■□ 3.11
UBR1Q8IWV7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC34.49■■■■□ 3.11
UBR1Q8IWV7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC34.49■■■■□ 3.11
UBR1Q8IWV7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC34.49■■■■□ 3.11
UBR1Q8IWV7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC34.49■■■■□ 3.11
UBR1Q8IWV7 AC104564.3-201ENST00000582367 638 ntBASIC34.49■■■■□ 3.11
UBR1Q8IWV7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC34.49■■■■□ 3.11
UBR1Q8IWV7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC34.48■■■■□ 3.11
UBR1Q8IWV7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC34.48■■■■□ 3.11
UBR1Q8IWV7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC34.48■■■■□ 3.11
UBR1Q8IWV7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
UBR1Q8IWV7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC34.47■■■■□ 3.11
UBR1Q8IWV7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC34.47■■■■□ 3.11
UBR1Q8IWV7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC34.47■■■■□ 3.11
UBR1Q8IWV7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC34.47■■■■□ 3.11
UBR1Q8IWV7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC34.47■■■■□ 3.11
UBR1Q8IWV7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC34.47■■■■□ 3.11
UBR1Q8IWV7 AC092666.2-201ENST00000613287 246 ntBASIC34.47■■■■□ 3.11
UBR1Q8IWV7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
UBR1Q8IWV7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC34.46■■■■□ 3.11
UBR1Q8IWV7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC34.46■■■■□ 3.11
UBR1Q8IWV7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC34.46■■■■□ 3.11
UBR1Q8IWV7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
UBR1Q8IWV7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
UBR1Q8IWV7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC34.44■■■■□ 3.1
UBR1Q8IWV7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
UBR1Q8IWV7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC34.44■■■■□ 3.1
UBR1Q8IWV7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
UBR1Q8IWV7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC34.44■■■■□ 3.1
UBR1Q8IWV7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC34.44■■■■□ 3.1
UBR1Q8IWV7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
UBR1Q8IWV7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC34.43■■■■□ 3.1
UBR1Q8IWV7 SNX5-217ENST00000606557 1087 ntBASIC34.43■■■■□ 3.1
UBR1Q8IWV7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC34.43■■■■□ 3.1
UBR1Q8IWV7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
UBR1Q8IWV7 DRD5P2-201ENST00000421395 2012 ntBASIC34.42■■■■□ 3.1
UBR1Q8IWV7 AC142381.2-201ENST00000566120 298 ntBASIC34.42■■■■□ 3.1
UBR1Q8IWV7 LINC01003-201ENST00000564834 1764 ntBASIC34.41■■■■□ 3.1
UBR1Q8IWV7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC34.41■■■■□ 3.1
UBR1Q8IWV7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC34.41■■■■□ 3.1
UBR1Q8IWV7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC34.41■■■■□ 3.1
UBR1Q8IWV7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
UBR1Q8IWV7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC34.41■■■■□ 3.1
UBR1Q8IWV7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC34.4■■■■□ 3.1
UBR1Q8IWV7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC34.4■■■■□ 3.1
UBR1Q8IWV7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
UBR1Q8IWV7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC34.39■■■■□ 3.1
UBR1Q8IWV7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC34.39■■■■□ 3.1
UBR1Q8IWV7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
UBR1Q8IWV7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC34.38■■■■□ 3.09
UBR1Q8IWV7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC34.38■■■■□ 3.09
UBR1Q8IWV7 ABCB10P1-201ENST00000614297 2181 ntBASIC34.38■■■■□ 3.09
UBR1Q8IWV7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Retrieved 100 of 98,524 protein–RNA pairs in 440.7 ms