Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC30.45■■■□□ 2.47
COL23A1Q86Y22 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
COL23A1Q86Y22 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
COL23A1Q86Y22 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.44■■■□□ 2.46
COL23A1Q86Y22 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.44■■■□□ 2.46
COL23A1Q86Y22 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC30.44■■■□□ 2.46
COL23A1Q86Y22 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.44■■■□□ 2.46
COL23A1Q86Y22 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.43■■■□□ 2.46
COL23A1Q86Y22 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
COL23A1Q86Y22 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC30.43■■■□□ 2.46
COL23A1Q86Y22 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
COL23A1Q86Y22 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC30.43■■■□□ 2.46
COL23A1Q86Y22 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.43■■■□□ 2.46
COL23A1Q86Y22 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC30.42■■■□□ 2.46
COL23A1Q86Y22 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC30.42■■■□□ 2.46
COL23A1Q86Y22 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
COL23A1Q86Y22 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
COL23A1Q86Y22 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
COL23A1Q86Y22 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
COL23A1Q86Y22 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC30.41■■■□□ 2.46
COL23A1Q86Y22 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.41■■■□□ 2.46
COL23A1Q86Y22 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
COL23A1Q86Y22 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.4■■■□□ 2.46
COL23A1Q86Y22 UNC93B3-201ENST00000308076 687 ntBASIC30.4■■■□□ 2.46
COL23A1Q86Y22 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
COL23A1Q86Y22 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.4■■■□□ 2.46
COL23A1Q86Y22 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC30.4■■■□□ 2.46
COL23A1Q86Y22 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
COL23A1Q86Y22 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
COL23A1Q86Y22 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.4■■■□□ 2.46
COL23A1Q86Y22 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
COL23A1Q86Y22 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC30.39■■■□□ 2.46
COL23A1Q86Y22 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
COL23A1Q86Y22 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
COL23A1Q86Y22 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
COL23A1Q86Y22 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC30.38■■■□□ 2.45
COL23A1Q86Y22 AC011551.1-201ENST00000614101 683 ntBASIC30.38■■■□□ 2.45
COL23A1Q86Y22 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
COL23A1Q86Y22 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
COL23A1Q86Y22 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC30.37■■■□□ 2.45
COL23A1Q86Y22 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC30.37■■■□□ 2.45
COL23A1Q86Y22 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.37■■■□□ 2.45
COL23A1Q86Y22 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
COL23A1Q86Y22 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
COL23A1Q86Y22 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
COL23A1Q86Y22 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
COL23A1Q86Y22 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.36■■■□□ 2.45
COL23A1Q86Y22 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
COL23A1Q86Y22 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
COL23A1Q86Y22 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
COL23A1Q86Y22 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.35■■■□□ 2.45
COL23A1Q86Y22 AL136162.1-201ENST00000607711 1078 ntBASIC30.35■■■□□ 2.45
COL23A1Q86Y22 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
COL23A1Q86Y22 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
COL23A1Q86Y22 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
COL23A1Q86Y22 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.34■■■□□ 2.45
COL23A1Q86Y22 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
COL23A1Q86Y22 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
COL23A1Q86Y22 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.34■■■□□ 2.45
COL23A1Q86Y22 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC30.34■■■□□ 2.45
COL23A1Q86Y22 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
COL23A1Q86Y22 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
COL23A1Q86Y22 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.33■■■□□ 2.45
COL23A1Q86Y22 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC30.33■■■□□ 2.45
COL23A1Q86Y22 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC30.33■■■□□ 2.45
COL23A1Q86Y22 BX255925.1-201ENST00000566954 1854 ntBASIC30.33■■■□□ 2.45
COL23A1Q86Y22 TFPT-201ENST00000391757 774 ntTSL 5 BASIC30.32■■■□□ 2.44
COL23A1Q86Y22 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
COL23A1Q86Y22 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
COL23A1Q86Y22 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
COL23A1Q86Y22 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
COL23A1Q86Y22 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
COL23A1Q86Y22 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
COL23A1Q86Y22 AF131216.4-201ENST00000638924 1588 ntBASIC30.31■■■□□ 2.44
COL23A1Q86Y22 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
COL23A1Q86Y22 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
COL23A1Q86Y22 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
COL23A1Q86Y22 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
COL23A1Q86Y22 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
COL23A1Q86Y22 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
COL23A1Q86Y22 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.28■■■□□ 2.44
COL23A1Q86Y22 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
COL23A1Q86Y22 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
COL23A1Q86Y22 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
COL23A1Q86Y22 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
COL23A1Q86Y22 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
COL23A1Q86Y22 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC30.27■■■□□ 2.44
COL23A1Q86Y22 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.27■■■□□ 2.44
COL23A1Q86Y22 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
COL23A1Q86Y22 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
COL23A1Q86Y22 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.26■■■□□ 2.44
COL23A1Q86Y22 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
COL23A1Q86Y22 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
COL23A1Q86Y22 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC30.26■■■□□ 2.43
COL23A1Q86Y22 ANKRD20A6P-201ENST00000618763 204 ntBASIC30.26■■■□□ 2.43
COL23A1Q86Y22 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
COL23A1Q86Y22 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
COL23A1Q86Y22 EDA-201ENST00000338901 1233 ntBASIC30.25■■■□□ 2.43
COL23A1Q86Y22 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
COL23A1Q86Y22 CLTA-206ENST00000466396 695 ntTSL 2 BASIC30.25■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms