Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RSPH3Q86UC2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.27■■□□□ 1.8
RSPH3Q86UC2 UNC93B8-201ENST00000511903 705 ntBASIC26.26■■□□□ 1.79
RSPH3Q86UC2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.26■■□□□ 1.79
RSPH3Q86UC2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RSPH3Q86UC2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.26■■□□□ 1.79
RSPH3Q86UC2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RSPH3Q86UC2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RSPH3Q86UC2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RSPH3Q86UC2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RSPH3Q86UC2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.24■■□□□ 1.79
RSPH3Q86UC2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.24■■□□□ 1.79
RSPH3Q86UC2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.24■■□□□ 1.79
RSPH3Q86UC2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.24■■□□□ 1.79
RSPH3Q86UC2 MIR4281-201ENST00000580852 62 ntBASIC26.24■■□□□ 1.79
RSPH3Q86UC2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.24■■□□□ 1.79
RSPH3Q86UC2 AC008406.3-201ENST00000620001 1374 ntBASIC26.23■■□□□ 1.79
RSPH3Q86UC2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RSPH3Q86UC2 TSPY9P-201ENST00000440215 945 ntBASIC26.23■■□□□ 1.79
RSPH3Q86UC2 TSPY11P-201ENST00000442607 1045 ntBASIC26.23■■□□□ 1.79
RSPH3Q86UC2 AC011551.1-201ENST00000614101 683 ntBASIC26.23■■□□□ 1.79
RSPH3Q86UC2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.23■■□□□ 1.79
RSPH3Q86UC2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.22■■□□□ 1.79
RSPH3Q86UC2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.22■■□□□ 1.79
RSPH3Q86UC2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.22■■□□□ 1.79
RSPH3Q86UC2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
RSPH3Q86UC2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RSPH3Q86UC2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RSPH3Q86UC2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RSPH3Q86UC2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RSPH3Q86UC2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.21■■□□□ 1.79
RSPH3Q86UC2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RSPH3Q86UC2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RSPH3Q86UC2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RSPH3Q86UC2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RSPH3Q86UC2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RSPH3Q86UC2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
RSPH3Q86UC2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.2■■□□□ 1.78
RSPH3Q86UC2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RSPH3Q86UC2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.2■■□□□ 1.78
RSPH3Q86UC2 AC092028.1-203ENST00000608262 953 ntBASIC26.2■■□□□ 1.78
RSPH3Q86UC2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.2■■□□□ 1.78
RSPH3Q86UC2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RSPH3Q86UC2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RSPH3Q86UC2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.19■■□□□ 1.78
RSPH3Q86UC2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.19■■□□□ 1.78
RSPH3Q86UC2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.19■■□□□ 1.78
RSPH3Q86UC2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RSPH3Q86UC2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RSPH3Q86UC2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RSPH3Q86UC2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.18■■□□□ 1.78
RSPH3Q86UC2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.18■■□□□ 1.78
RSPH3Q86UC2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RSPH3Q86UC2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RSPH3Q86UC2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.17■■□□□ 1.78
RSPH3Q86UC2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
RSPH3Q86UC2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RSPH3Q86UC2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.17■■□□□ 1.78
RSPH3Q86UC2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.17■■□□□ 1.78
RSPH3Q86UC2 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.17■■□□□ 1.78
RSPH3Q86UC2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RSPH3Q86UC2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
RSPH3Q86UC2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
RSPH3Q86UC2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.16■■□□□ 1.78
RSPH3Q86UC2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.16■■□□□ 1.78
RSPH3Q86UC2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.16■■□□□ 1.78
RSPH3Q86UC2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RSPH3Q86UC2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
RSPH3Q86UC2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
RSPH3Q86UC2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
RSPH3Q86UC2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.15■■□□□ 1.78
RSPH3Q86UC2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RSPH3Q86UC2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RSPH3Q86UC2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
RSPH3Q86UC2 AC019069.1-201ENST00000610008 1333 ntBASIC26.14■■□□□ 1.78
RSPH3Q86UC2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.14■■□□□ 1.78
RSPH3Q86UC2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
RSPH3Q86UC2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.14■■□□□ 1.78
RSPH3Q86UC2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
RSPH3Q86UC2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.14■■□□□ 1.78
RSPH3Q86UC2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RSPH3Q86UC2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RSPH3Q86UC2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
RSPH3Q86UC2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
RSPH3Q86UC2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RSPH3Q86UC2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.12■■□□□ 1.77
RSPH3Q86UC2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RSPH3Q86UC2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RSPH3Q86UC2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RSPH3Q86UC2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
RSPH3Q86UC2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
RSPH3Q86UC2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.11■■□□□ 1.77
RSPH3Q86UC2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.11■■□□□ 1.77
RSPH3Q86UC2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
RSPH3Q86UC2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RSPH3Q86UC2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.1■■□□□ 1.77
RSPH3Q86UC2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.1■■□□□ 1.77
RSPH3Q86UC2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RSPH3Q86UC2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.1■■□□□ 1.77
RSPH3Q86UC2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms