Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDHR3Q6ZTQ4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.82■■□□□ 1.4
CDHR3Q6ZTQ4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDHR3Q6ZTQ4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDHR3Q6ZTQ4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDHR3Q6ZTQ4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.82■■□□□ 1.4
CDHR3Q6ZTQ4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDHR3Q6ZTQ4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDHR3Q6ZTQ4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.81■■□□□ 1.4
CDHR3Q6ZTQ4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDHR3Q6ZTQ4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.81■■□□□ 1.4
CDHR3Q6ZTQ4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
CDHR3Q6ZTQ4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.81■■□□□ 1.4
CDHR3Q6ZTQ4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CDHR3Q6ZTQ4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDHR3Q6ZTQ4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.81■■□□□ 1.4
CDHR3Q6ZTQ4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDHR3Q6ZTQ4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
CDHR3Q6ZTQ4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
CDHR3Q6ZTQ4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDHR3Q6ZTQ4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDHR3Q6ZTQ4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDHR3Q6ZTQ4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDHR3Q6ZTQ4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDHR3Q6ZTQ4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CDHR3Q6ZTQ4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.79■■□□□ 1.4
CDHR3Q6ZTQ4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDHR3Q6ZTQ4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDHR3Q6ZTQ4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDHR3Q6ZTQ4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
CDHR3Q6ZTQ4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDHR3Q6ZTQ4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDHR3Q6ZTQ4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.79■■□□□ 1.4
CDHR3Q6ZTQ4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDHR3Q6ZTQ4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDHR3Q6ZTQ4 LINC01124-201ENST00000409786 2117 ntBASIC23.78■■□□□ 1.4
CDHR3Q6ZTQ4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CDHR3Q6ZTQ4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.78■■□□□ 1.4
CDHR3Q6ZTQ4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CDHR3Q6ZTQ4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.78■■□□□ 1.4
CDHR3Q6ZTQ4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDHR3Q6ZTQ4 SLC6A10P-202ENST00000431994 2058 ntBASIC23.78■■□□□ 1.4
CDHR3Q6ZTQ4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDHR3Q6ZTQ4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDHR3Q6ZTQ4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDHR3Q6ZTQ4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDHR3Q6ZTQ4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDHR3Q6ZTQ4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDHR3Q6ZTQ4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDHR3Q6ZTQ4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDHR3Q6ZTQ4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.76■■□□□ 1.39
CDHR3Q6ZTQ4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDHR3Q6ZTQ4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CDHR3Q6ZTQ4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDHR3Q6ZTQ4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CDHR3Q6ZTQ4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDHR3Q6ZTQ4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDHR3Q6ZTQ4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CDHR3Q6ZTQ4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDHR3Q6ZTQ4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDHR3Q6ZTQ4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDHR3Q6ZTQ4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDHR3Q6ZTQ4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CDHR3Q6ZTQ4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CDHR3Q6ZTQ4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDHR3Q6ZTQ4 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.73■■□□□ 1.39
CDHR3Q6ZTQ4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDHR3Q6ZTQ4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.73■■□□□ 1.39
CDHR3Q6ZTQ4 AC097639.1-201ENST00000565519 1891 ntBASIC23.73■■□□□ 1.39
CDHR3Q6ZTQ4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDHR3Q6ZTQ4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDHR3Q6ZTQ4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.73■■□□□ 1.39
CDHR3Q6ZTQ4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDHR3Q6ZTQ4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.73■■□□□ 1.39
CDHR3Q6ZTQ4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CDHR3Q6ZTQ4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDHR3Q6ZTQ4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CDHR3Q6ZTQ4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDHR3Q6ZTQ4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDHR3Q6ZTQ4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDHR3Q6ZTQ4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CDHR3Q6ZTQ4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDHR3Q6ZTQ4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDHR3Q6ZTQ4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDHR3Q6ZTQ4 AP003733.4-201ENST00000623785 1697 ntBASIC23.71■■□□□ 1.39
CDHR3Q6ZTQ4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDHR3Q6ZTQ4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDHR3Q6ZTQ4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.71■■□□□ 1.39
CDHR3Q6ZTQ4 NTF6A-201ENST00000591175 560 ntBASIC23.71■■□□□ 1.39
CDHR3Q6ZTQ4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDHR3Q6ZTQ4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDHR3Q6ZTQ4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDHR3Q6ZTQ4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDHR3Q6ZTQ4 SMPD5-203ENST00000639008 1464 ntBASIC23.7■■□□□ 1.38
CDHR3Q6ZTQ4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDHR3Q6ZTQ4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDHR3Q6ZTQ4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.7■■□□□ 1.38
CDHR3Q6ZTQ4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDHR3Q6ZTQ4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDHR3Q6ZTQ4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms