Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 CCDC12-207ENST00000494655 793 ntTSL 226.47■■□□□ 1.833e-6■□□□□ 9.8
HNRNPUQ00839 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC25.88■■□□□ 1.738e-6■□□□□ 9.8
HNRNPUQ00839 SLC29A2-204ENST00000541567 2272 ntTSL 1 (best)25.74■■□□□ 1.718e-6■□□□□ 9.8
HNRNPUQ00839 YIPF2-203ENST00000586575 932 ntTSL 525.05■■□□□ 1.68e-6■□□□□ 9.8
HNRNPUQ00839 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.468e-6■□□□□ 9.8
HNRNPUQ00839 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.348e-6■□□□□ 9.8
HNRNPUQ00839 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.328e-6■□□□□ 9.8
HNRNPUQ00839 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC23.21■■□□□ 1.318e-6■□□□□ 9.8
HNRNPUQ00839 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.278e-6■□□□□ 9.8
HNRNPUQ00839 CCDC12-213ENST00000605875 380 ntTSL 522.78■■□□□ 1.243e-6■□□□□ 9.8
HNRNPUQ00839 CCDC12-205ENST00000488069 897 ntTSL 222.67■■□□□ 1.223e-6■□□□□ 9.8
HNRNPUQ00839 CCDC12-208ENST00000603885 560 ntTSL 322.67■■□□□ 1.223e-6■□□□□ 9.8
HNRNPUQ00839 SLC29A2-203ENST00000540386 2474 ntTSL 1 (best)22.11■■□□□ 1.138e-6■□□□□ 9.8
HNRNPUQ00839 YIPF2-202ENST00000585858 656 ntTSL 321.87■■□□□ 1.098e-6■□□□□ 9.8
HNRNPUQ00839 YIPF2-207ENST00000588962 788 ntTSL 221.87■■□□□ 1.098e-6■□□□□ 9.8
HNRNPUQ00839 YIPF2-205ENST00000587943 796 ntTSL 521.8■■□□□ 1.088e-6■□□□□ 9.8
HNRNPUQ00839 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC21.64■■□□□ 1.058e-6■□□□□ 9.8
HNRNPUQ00839 CCDC12-212ENST00000605358 402 ntTSL 521.56■■□□□ 1.043e-6■□□□□ 9.8
HNRNPUQ00839 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC21.42■■□□□ 1.023e-6■□□□□ 9.8
HNRNPUQ00839 CCDC12-210ENST00000604181 550 ntTSL 420.39■□□□□ 0.853e-6■□□□□ 9.8
HNRNPUQ00839 HDAC1-206ENST00000476391 2409 ntTSL 1 (best)19■□□□□ 0.638e-6■□□□□ 9.8
HNRNPUQ00839 HDAC1-208ENST00000482310 779 ntTSL 517.37■□□□□ 0.378e-6■□□□□ 9.8
HNRNPUQ00839 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.273e-6■□□□□ 9.8
HNRNPUQ00839 HDAC1-210ENST00000490081 1047 ntTSL 316.26■□□□□ 0.198e-6■□□□□ 9.8
HNRNPUQ00839 CCDC12-209ENST00000604164 399 ntTSL 314.6□□□□□ -0.073e-6■□□□□ 9.8
HNRNPUQ00839 CCDC12-203ENST00000446836 412 ntTSL 314.11□□□□□ -0.153e-6■□□□□ 9.8
HNRNPUQ00839 CCDC12-204ENST00000460035 572 ntTSL 214.08□□□□□ -0.163e-6■□□□□ 9.8
HNRNPUQ00839 DNAJC9-202ENST00000453189 762 ntTSL 39.28□□□□□ -0.926e-6■□□□□ 9.8
HNRNPUQ00839 DNAJC9-203ENST00000469143 362 ntTSL 36.65□□□□□ -1.346e-6■□□□□ 9.8
HNRNPUQ00839 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC15.55■□□□□ 0.086e-7■□□□□ 9.7
HNRNPUQ00839 AC138409.2-202ENST00000507274 458 ntBASIC6.61□□□□□ -1.356e-7■□□□□ 9.7
HNRNPUQ00839 IGFL2-AS1-201ENST00000594027 294 ntTSL 314.42□□□□□ -0.13e-9■□□□□ 9.7
HNRNPUQ00839 IGFL2-AS1-205ENST00000599817 340 ntTSL 213.82□□□□□ -0.23e-9■□□□□ 9.7
HNRNPUQ00839 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC12.86□□□□□ -0.353e-9■□□□□ 9.7
HNRNPUQ00839 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.123e-6■□□□□ 9.6
HNRNPUQ00839 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.413e-6■□□□□ 9.6
HNRNPUQ00839 NME4-209ENST00000460297 1652 ntTSL 532.3■■■□□ 2.765e-8■□□□□ 9.6
HNRNPUQ00839 NME4-204ENST00000433358 966 ntTSL 329.1■■■□□ 2.255e-8■□□□□ 9.6
HNRNPUQ00839 NME4-206ENST00000448828 1167 ntTSL 228.45■■■□□ 2.145e-8■□□□□ 9.6
HNRNPUQ00839 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.975e-8■□□□□ 9.6
HNRNPUQ00839 NME4-202ENST00000382940 766 ntTSL 3 BASIC27.33■■□□□ 1.975e-8■□□□□ 9.6
HNRNPUQ00839 NME4-211ENST00000620944 1193 ntTSL 2 BASIC27.33■■□□□ 1.975e-8■□□□□ 9.6
HNRNPUQ00839 NME4-205ENST00000444498 1111 ntTSL 323.66■■□□□ 1.385e-8■□□□□ 9.6
HNRNPUQ00839 NME4-207ENST00000450036 985 ntTSL 3 BASIC21.02■□□□□ 0.965e-8■□□□□ 9.6
HNRNPUQ00839 NME4-212ENST00000621774 904 ntTSL 3 BASIC21■□□□□ 0.955e-8■□□□□ 9.6
HNRNPUQ00839 NME4-203ENST00000397722 1232 ntTSL 2 BASIC18.29■□□□□ 0.525e-8■□□□□ 9.6
HNRNPUQ00839 NME4-208ENST00000454619 719 ntTSL 517.13■□□□□ 0.335e-8■□□□□ 9.6
HNRNPUQ00839 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC27.64■■■□□ 2.026e-6■□□□□ 9.6
HNRNPUQ00839 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.89■■□□□ 1.416e-6■□□□□ 9.6
HNRNPUQ00839 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.016e-6■□□□□ 9.6
HNRNPUQ00839 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.84■□□□□ 0.936e-6■□□□□ 9.6
HNRNPUQ00839 C22orf39-204ENST00000509549 2979 ntTSL 216.41■□□□□ 0.226e-6■□□□□ 9.6
HNRNPUQ00839 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC15.76■□□□□ 0.116e-6■□□□□ 9.6
HNRNPUQ00839 HIRA-203ENST00000452818 453 ntTSL 513.82□□□□□ -0.26e-6■□□□□ 9.6
HNRNPUQ00839 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.064e-7■□□□□ 9.6
HNRNPUQ00839 CYP11B1-205ENST00000519285 2562 ntTSL 1 (best)15.42■□□□□ 0.065e-14■□□□□ 9.6
HNRNPUQ00839 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC27.37■■□□□ 1.975e-6■□□□□ 9.5
HNRNPUQ00839 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.965e-6■□□□□ 9.5
HNRNPUQ00839 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC27.11■■□□□ 1.935e-6■□□□□ 9.5
HNRNPUQ00839 GPAM-203ENST00000480130 514 ntTSL 28.55□□□□□ -1.045e-7■□□□□ 9.5
HNRNPUQ00839 GPAM-204ENST00000498541 351 ntTSL 35.71□□□□□ -1.55e-7■□□□□ 9.5
HNRNPUQ00839 MEG3-219ENST00000522618 954 ntTSL 221.05■□□□□ 0.962e-8■□□□□ 9.5
HNRNPUQ00839 MEG3-223ENST00000524131 721 ntTSL 5 BASIC15.53■□□□□ 0.082e-8■□□□□ 9.5
HNRNPUQ00839 LINC00894-205ENST00000449111 3414 ntTSL 512.88□□□□□ -0.354e-6■□□□□ 9.4
HNRNPUQ00839 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC21.18■□□□□ 0.987e-7■□□□□ 9.4
HNRNPUQ00839 FABP1-204ENST00000495375 2084 ntTSL 320.28■□□□□ 0.847e-7■□□□□ 9.4
HNRNPUQ00839 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.667e-7■□□□□ 9.4
HNRNPUQ00839 FABP1-203ENST00000472846 546 ntTSL 27.8□□□□□ -1.167e-7■□□□□ 9.4
HNRNPUQ00839 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.658e-6■□□□□ 9.4
HNRNPUQ00839 NUDT4-207ENST00000550056 531 ntTSL 420.7■□□□□ 0.98e-6■□□□□ 9.4
HNRNPUQ00839 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.658e-6■□□□□ 9.4
HNRNPUQ00839 NUDT4-203ENST00000546925 569 ntTSL 415.3■□□□□ 0.048e-6■□□□□ 9.4
HNRNPUQ00839 NUDT4-204ENST00000547014 1419 ntTSL 2 BASIC14.04□□□□□ -0.168e-6■□□□□ 9.4
HNRNPUQ00839 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC11.71□□□□□ -0.538e-6■□□□□ 9.4
HNRNPUQ00839 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC10.55□□□□□ -0.728e-6■□□□□ 9.4
HNRNPUQ00839 MLXIPL-207ENST00000453275 690 ntTSL 524.75■■□□□ 1.556e-8■□□□□ 9.4
HNRNPUQ00839 MLXIPL-208ENST00000456640 706 ntTSL 522.14■■□□□ 1.136e-8■□□□□ 9.4
HNRNPUQ00839 AC005089.1-201ENST00000619486 2241 ntBASIC21.02■□□□□ 0.966e-8■□□□□ 9.4
HNRNPUQ00839 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC20.61■□□□□ 0.896e-8■□□□□ 9.4
HNRNPUQ00839 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC20.57■□□□□ 0.886e-8■□□□□ 9.4
HNRNPUQ00839 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.836e-8■□□□□ 9.4
HNRNPUQ00839 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC20.21■□□□□ 0.836e-8■□□□□ 9.4
HNRNPUQ00839 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.826e-8■□□□□ 9.4
HNRNPUQ00839 MLXIPL-202ENST00000345114 3079 ntTSL 1 (best)19.11■□□□□ 0.656e-8■□□□□ 9.4
HNRNPUQ00839 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.928e-7■□□□□ 9.3
HNRNPUQ00839 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.75■■□□□ 1.238e-7■□□□□ 9.3
HNRNPUQ00839 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC22.31■■□□□ 1.168e-7■□□□□ 9.3
HNRNPUQ00839 PROX1-204ENST00000471129 900 ntTSL 321.73■■□□□ 1.078e-7■□□□□ 9.3
HNRNPUQ00839 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.028e-7■□□□□ 9.3
HNRNPUQ00839 FOXA3-202ENST00000594297 538 ntTSL 319.93■□□□□ 0.788e-7■□□□□ 9.3
HNRNPUQ00839 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.668e-7■□□□□ 9.3
HNRNPUQ00839 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC18.07■□□□□ 0.488e-7■□□□□ 9.3
HNRNPUQ00839 PROX1-206ENST00000607425 560 ntTSL 313.86□□□□□ -0.198e-7■□□□□ 9.3
HNRNPUQ00839 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC19.94■□□□□ 0.784e-59■□□□□ 9.3
HNRNPUQ00839 ACTR3C-204ENST00000478393 5697 ntTSL 1 (best)15.11■□□□□ 0.011e-7■□□□□ 9.2
HNRNPUQ00839 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.991e-7■□□□□ 9.2
HNRNPUQ00839 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC27.88■■■□□ 2.058e-9■□□□□ 9.2
HNRNPUQ00839 ECHDC2-202ENST00000371520 1606 ntTSL 1 (best)26.68■■□□□ 1.868e-9■□□□□ 9.2
HNRNPUQ00839 ECHDC2-225ENST00000544365 1335 ntTSL 526.1■■□□□ 1.778e-9■□□□□ 9.2
HNRNPUQ00839 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.755e-7■□□□□ 9.2
Retrieved 100 of 2,288 protein–RNA pairs in 48.9 ms