RNA–Protein interactions for RNA: ENST00000522618.1

MEG3-219, Transcript of maternally expressed 3, humanhuman

TSL 2

Gene MEG3, Length 954 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-219ENST00000522618 NISCHQ9Y2I1 1504 aa41.1■■■■■ 4.17
MEG3-219ENST00000522618 ABCC9O60706 1549 aa37.71■■■■□ 3.63
MEG3-219ENST00000522618 CCDC180Q9P1Z9 1646 aa36.95■■■■□ 3.51
MEG3-219ENST00000522618 DNAJC5BQ9UF47 199 aa35.98■■■■□ 3.35
MEG3-219ENST00000522618 RB1CC1Q8TDY2 1594 aa35.52■■■■□ 3.28
MEG3-219ENST00000522618 DCAF8L2P0C7V8 631 aa35.15■■■■□ 3.22
MEG3-219ENST00000522618 NACADO15069 1562 aa35.15■■■■□ 3.22
MEG3-219ENST00000522618 PABPN1Q86U42 306 aaKnown RBP eCLIP35.13■■■■□ 3.21
MEG3-219ENST00000522618 UNC13AQ9UPW8 1703 aa34.64■■■■□ 3.14
MEG3-219ENST00000522618 BICRAQ9NZM4 1560 aa34.55■■■■□ 3.12
MEG3-219ENST00000522618 MYO15BQ96JP2 1530 aa34.46■■■■□ 3.11
MEG3-219ENST00000522618 CECR2Q9BXF3 1484 aa34■■■■□ 3.03
MEG3-219ENST00000522618 CC2D2AQ9P2K1 1620 aa33.94■■■■□ 3.02
MEG3-219ENST00000522618 ZCCHC6Q5VYS8 1495 aaKnown RBP33.92■■■■□ 3.02
MEG3-219ENST00000522618 SHROOM4Q9ULL8 1493 aa33.92■■■■□ 3.02
MEG3-219ENST00000522618 DCAF1Q9Y4B6 1507 aa33.84■■■■□ 3.01
MEG3-219ENST00000522618 SCRIBQ14160 1630 aa33.76■■■■□ 3
MEG3-219ENST00000522618 EIF4G1Q04637 1599 aaKnown RBP33.74■■■□□ 2.99
MEG3-219ENST00000522618 DNAJC5Q9H3Z4 198 aa33.37■■■□□ 2.93
MEG3-219ENST00000522618 CUX2O14529 1486 aa32.62■■■□□ 2.81
MEG3-219ENST00000522618 ERCC6Q03468 1493 aa32.55■■■□□ 2.8
MEG3-219ENST00000522618 NCAPD3P42695 1498 aa32.54■■■□□ 2.8
MEG3-219ENST00000522618 ATAD2BQ9ULI0 1458 aa32.37■■■□□ 2.77
MEG3-219ENST00000522618 NESP48681 1621 aa32.24■■■□□ 2.75
MEG3-219ENST00000522618 SMARCA2P51531 1590 aa32.17■■■□□ 2.74
MEG3-219ENST00000522618 HMGXB3Q12766 1538 aa32.15■■■□□ 2.74
MEG3-219ENST00000522618 SMARCA4P51532 1647 aa32.12■■■□□ 2.73
MEG3-219ENST00000522618 BAZ1BQ9UIG0 1483 aaKnown RBP32■■■□□ 2.71
MEG3-219ENST00000522618 THOC2Q8NI27 1593 aaKnown RBP31.89■■■□□ 2.7
MEG3-219ENST00000522618 BAZ1AQ9NRL2 1556 aaPredicted RBP31.89■■■□□ 2.7
MEG3-219ENST00000522618 LAMC3Q9Y6N6 1575 aa31.8■■■□□ 2.68
MEG3-219ENST00000522618 PEG3Q9GZU2 1588 aa31.79■■■□□ 2.68
MEG3-219ENST00000522618 TRIM41Q8WV44 630 aa31.73■■■□□ 2.67
MEG3-219ENST00000522618 PDS5BQ9NTI5 1447 aa31.72■■■□□ 2.67
MEG3-219ENST00000522618 MROH2BQ7Z745 1585 aa31.69■■■□□ 2.66
MEG3-219ENST00000522618 KIF21AQ7Z4S6 1674 aa31.67■■■□□ 2.66
MEG3-219ENST00000522618 CADPSQ9ULU8 1353 aa31.56■■■□□ 2.64
MEG3-219ENST00000522618 MRC2Q9UBG0 1479 aa31.46■■■□□ 2.63
MEG3-219ENST00000522618 WDR62O43379 1518 aa31.35■■■□□ 2.61
MEG3-219ENST00000522618 WIZO95785 1651 aa31.24■■■□□ 2.59
MEG3-219ENST00000522618 CEP164Q9UPV0 1460 aa31.21■■■□□ 2.59
MEG3-219ENST00000522618 OSCARQ8IYS5 282 aa31.19■■■□□ 2.58
MEG3-219ENST00000522618 FANCD2Q9BXW9 1451 aa31.17■■■□□ 2.58
MEG3-219ENST00000522618 CFTRP13569 1480 aa31.04■■■□□ 2.56
MEG3-219ENST00000522618 URB2Q14146 1524 aaKnown RBP30.95■■■□□ 2.55
MEG3-219ENST00000522618 RSF1Q96T23 1441 aaPredicted RBP30.88■■■□□ 2.53
MEG3-219ENST00000522618 TOP2AP11388 1531 aaKnown RBP30.78■■■□□ 2.52
MEG3-219ENST00000522618 RIMBP3CA6NJZ7 1639 aa30.7■■■□□ 2.51
MEG3-219ENST00000522618 RIMBP3BA6NNM3 1639 aa30.7■■■□□ 2.51
MEG3-219ENST00000522618 RIMBP3Q9UFD9 1639 aa30.7■■■□□ 2.51
MEG3-219ENST00000522618 ZNF608Q9ULD9 1512 aaPredicted RBP30.69■■■□□ 2.5
MEG3-219ENST00000522618 IFT140Q96RY7 1462 aa30.63■■■□□ 2.49
MEG3-219ENST00000522618 ARHGEF11O15085 1522 aa30.58■■■□□ 2.49
MEG3-219ENST00000522618 CYB5RLQ6IPT4 315 aa30.54■■■□□ 2.48
MEG3-219ENST00000522618 CCDC88BA6NC98 1476 aa30.54■■■□□ 2.48
MEG3-219ENST00000522618 TOPBP1Q92547 1522 aa30.51■■■□□ 2.47
MEG3-219ENST00000522618 PRDM2Q13029 1718 aa30.46■■■□□ 2.47
MEG3-219ENST00000522618 AQRO60306 1485 aaKnown RBP eCLIP30.38■■■□□ 2.45
MEG3-219ENST00000522618 TRHP20396 242 aaPredicted RBP30.37■■■□□ 2.45
MEG3-219ENST00000522618 EIF4G3O43432 1585 aaKnown RBP30.37■■■□□ 2.45
MEG3-219ENST00000522618 ABCC8Q09428 1581 aa30.37■■■□□ 2.45
MEG3-219ENST00000522618 FBLN2P98095 1184 aa30.35■■■□□ 2.45
MEG3-219ENST00000522618 DNMBPQ6XZF7 1577 aa30.28■■■□□ 2.44
MEG3-219ENST00000522618 ARAP1Q96P48 1450 aa30.26■■■□□ 2.44
MEG3-219ENST00000522618 TARBP1Q13395 1621 aaKnown RBP30.22■■■□□ 2.43
MEG3-219ENST00000522618 CHD1O14646 1710 aa30.22■■■□□ 2.43
MEG3-219ENST00000522618 POLA1P09884 1462 aaPredicted RBP30.17■■■□□ 2.42
MEG3-219ENST00000522618 RAD54L2Q9Y4B4 1467 aa30.13■■■□□ 2.41
MEG3-219ENST00000522618 TDRD9Q8NDG6 1382 aaKnown RBP30.13■■■□□ 2.41
MEG3-219ENST00000522618 SOGA1O94964 1423 aa30.07■■■□□ 2.4
MEG3-219ENST00000522618 CHMP7Q8WUX9 453 aaPredicted RBP30■■■□□ 2.39
MEG3-219ENST00000522618 SNAPC4Q5SXM2 1469 aa29.98■■■□□ 2.39
MEG3-219ENST00000522618 CLASP1Q7Z460 1538 aa29.91■■■□□ 2.38
MEG3-219ENST00000522618 FGD5Q6ZNL6 1462 aa29.91■■■□□ 2.38
MEG3-219ENST00000522618 AEBP2Q6ZN18 517 aaPredicted RBP29.86■■■□□ 2.37
MEG3-219ENST00000522618 SYNJ1O43426 1573 aa29.83■■■□□ 2.37
MEG3-219ENST00000522618 MAGI1Q96QZ7 1491 aaPredicted RBP29.83■■■□□ 2.37
MEG3-219ENST00000522618 GRIN2BQ13224 1484 aa29.81■■■□□ 2.36
MEG3-219ENST00000522618 CUX1P39880 1505 aa29.79■■■□□ 2.36
MEG3-219ENST00000522618 WDR97A6NE52 1622 aa29.78■■■□□ 2.36
MEG3-219ENST00000522618 SYNJ2O15056 1496 aa29.77■■■□□ 2.36
MEG3-219ENST00000522618 GAPVD1Q14C86 1478 aa29.7■■■□□ 2.35
MEG3-219ENST00000522618 PBRM1Q86U86 1689 aa29.53■■■□□ 2.32
MEG3-219ENST00000522618 ABCA10Q8WWZ4 1543 aa29.5■■■□□ 2.31
MEG3-219ENST00000522618 ERCC6L2Q5T890 1561 aa29.48■■■□□ 2.31
MEG3-219ENST00000522618 ABCA5Q8WWZ7 1642 aa29.45■■■□□ 2.3
MEG3-219ENST00000522618 GRIN2AQ12879 1464 aa29.42■■■□□ 2.3
MEG3-219ENST00000522618 NUP160Q12769 1436 aa29.36■■■□□ 2.29
MEG3-219ENST00000522618 CEP170Q5SW79 1584 aa29.35■■■□□ 2.29
MEG3-219ENST00000522618 WRNQ14191 1432 aaPredicted RBP eCLIP29.32■■■□□ 2.28
MEG3-219ENST00000522618 ADAMTS12P58397 1594 aa29.28■■■□□ 2.28
MEG3-219ENST00000522618 FHAD1B1AJZ9 1412 aa29.26■■■□□ 2.27
MEG3-219ENST00000522618 SUPT5HO00267 1087 aaKnown RBP29.24■■■□□ 2.27
MEG3-219ENST00000522618 SHROOM2Q13796 1616 aa29.2■■■□□ 2.27
MEG3-219ENST00000522618 JPH4Q96JJ6 628 aa29.17■■■□□ 2.26
MEG3-219ENST00000522618 PRG4Q92954 1404 aaPredicted RBP29.17■■■□□ 2.26
MEG3-219ENST00000522618 TOP2BQ02880 1626 aa29.1■■■□□ 2.25
MEG3-219ENST00000522618 FAM69CQ0P6D2 419 aa29.1■■■□□ 2.25
MEG3-219ENST00000522618 ERICH3Q5RHP9 1530 aa29.1■■■□□ 2.25
MEG3-219ENST00000522618 KIF13AQ9H1H9 1805 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms